PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu021016.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 92aa    MW: 10564.2 Da    PI: 10.0259
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu021016.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260103.51.9e-32578174
       DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvy 74
                 +CaaCk+lrr+C++dC+++ yfp+++p++fa+vhk+FGasn+ k+l++lp ++r da++sl+yeA++r++dP+ 
  Oeu021016.1  5 RCAACKFLRRRCPSDCIFSLYFPSNNPQRFAYVHKIFGASNIGKMLQDLPVHRRADAADSLYYEAHCRIKDPIX 78
                 6***********************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MVSTRCAACK FLRRRCPSDC IFSLYFPSNN PQRFAYVHKI FGASNIGKML QDLPVHRRAD  60
AADSLYYEAH CRIKDPIXMK IYISRVKMQI A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.11e-35LBD family protein