PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021031.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1107aa MW: 122217 Da PI: 6.5775

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021031.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.4	1e-21	172	273	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d++ +W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++ Oeu021031.1 172 FCKTLTASDTSTHGGFSVPRRAAEKTfpsldftMQPPAQ--ELVARDLHDHVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEKQQ 265 99*******************999*96555444..8********************************************..568888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu021031.1 266 LLLGIRRA 273 9**997 PP
2	Auxin_resp	116.2	2.8e-38	298	381	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+haa+++s+F+v+YnPras+seFv++++k+ ka+ +++s+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ Oeu021031.1 298 ASHAAANNSPFSVFYNPRASPSEFVIPLAKYYKAVCsNQISLGMRFRMMFETEESGIRRYMGTITGISDLDPVRWKNSQWRNLQ 381 789***************************998669******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1107 aa Download sequence
MKTPANGAGA QPAATSTSDA AEVEKKSIIN PELWQACAGP LVNMPVAGTH VVYFPQGHME 60 KKSIINPELW QACAGPLVNM PVAGTHVVYF PQGHSEQVAA LMKKDVDAQI PSYPNLPSKL 120 LCLLHNITLL ADPETDEVYA QMTLQPVPSF DKDALFRSDL SMKANRPQME FFCKTLTASD 180 TSTHGGFSVP RRAAEKTFPS LDFTMQPPAQ ELVARDLHDH VWTFRHIYRG QPKRHLLTTG 240 WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANKQPTNL SSSVLSSDSM HIGILAAASH 300 AAANNSPFSV FYNPRASPSE FVIPLAKYYK AVCSNQISLG MRFRMMFETE ESGIRRYMGT 360 ITGISDLDPV RWKNSQWRNL QVGWDESTAR ERRNRVSIWE IEPVTAPFFI CPTTPFFCSK 420 SPGQQGTQDD DSSDPNNLVR RTMPWLGEDF GMKDPPTLPG LSLVQWMNLQ QKPSLANSMQ 480 PNSLNPLSTQ PIQQLDQLQK PPASTLNPLA SIIQTQQQFA DTMQPPRQNV MNQNLPTSQV 540 QAQLLQSQNP TQAQNAMQQQ QSVLNNQLQR SLPQNLPQQQ QNPSHVQQQD LMSFQSLDHA 600 SEQLHAPDNQ IQLQLLQKLH QQQQSLLAQQ SAISQPSELT QHQDQQKLPL DVSQKFSWSM 660 TDQLPEASQS KSTMLPQSHV IPQQVTRNNN QTNLQFAHPK LQQHQQSGTQ SELPGFGGNT 720 STPMNNQLSA GDGSLLKGAA GLGQSGITDE VPSCLTSPST NSCPSAVQSM MDGRSNRSTI 780 TRDEMAQSTL LRSTGVKNIS SNGNLVKDLQ QKPDVKPSVN ISKSQNQGCF ATQTYLNTAG 840 THIDYLDSSS SATSVLSQND FQTQHNNSAS FNSQSILFRA TSQVRELQGD RRNSSVPFGA 900 NNGNQLGMPI IPDPLITKSM VGSGDCSNNL SPGGEMVSTY ENPKETHPEL SSSMVSQSFG 960 VPDMILNSID STINDSSFMN GGAWAPPTQI PRMRTYTKVY KRGAVGRSID IARYMGYADL 1020 IQDLARRFGI EGQLEDRQRI GWKLVYVDHE NDVLLVGDDP WEEFVNCVRC IKILSPQEVQ 1080 QMSLDGDFGN SILQNQDCSS SDNGVN*

Sequence ? help Back to Top

Protein Sequence Length: 1107 aa Download sequence

MKTPANGAGA QPAATSTSDA AEVEKKSIIN PELWQACAGP LVNMPVAGTH VVYFPQGHME  60
KKSIINPELW QACAGPLVNM PVAGTHVVYF PQGHSEQVAA LMKKDVDAQI PSYPNLPSKL  120
LCLLHNITLL ADPETDEVYA QMTLQPVPSF DKDALFRSDL SMKANRPQME FFCKTLTASD  180
TSTHGGFSVP RRAAEKTFPS LDFTMQPPAQ ELVARDLHDH VWTFRHIYRG QPKRHLLTTG  240
WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANKQPTNL SSSVLSSDSM HIGILAAASH  300
AAANNSPFSV FYNPRASPSE FVIPLAKYYK AVCSNQISLG MRFRMMFETE ESGIRRYMGT  360
ITGISDLDPV RWKNSQWRNL QVGWDESTAR ERRNRVSIWE IEPVTAPFFI CPTTPFFCSK  420
SPGQQGTQDD DSSDPNNLVR RTMPWLGEDF GMKDPPTLPG LSLVQWMNLQ QKPSLANSMQ  480
PNSLNPLSTQ PIQQLDQLQK PPASTLNPLA SIIQTQQQFA DTMQPPRQNV MNQNLPTSQV  540
QAQLLQSQNP TQAQNAMQQQ QSVLNNQLQR SLPQNLPQQQ QNPSHVQQQD LMSFQSLDHA  600
SEQLHAPDNQ IQLQLLQKLH QQQQSLLAQQ SAISQPSELT QHQDQQKLPL DVSQKFSWSM  660
TDQLPEASQS KSTMLPQSHV IPQQVTRNNN QTNLQFAHPK LQQHQQSGTQ SELPGFGGNT  720
STPMNNQLSA GDGSLLKGAA GLGQSGITDE VPSCLTSPST NSCPSAVQSM MDGRSNRSTI  780
TRDEMAQSTL LRSTGVKNIS SNGNLVKDLQ QKPDVKPSVN ISKSQNQGCF ATQTYLNTAG  840
THIDYLDSSS SATSVLSQND FQTQHNNSAS FNSQSILFRA TSQVRELQGD RRNSSVPFGA  900
NNGNQLGMPI IPDPLITKSM VGSGDCSNNL SPGGEMVSTY ENPKETHPEL SSSMVSQSFG  960
VPDMILNSID STINDSSFMN GGAWAPPTQI PRMRTYTKVY KRGAVGRSID IARYMGYADL  1020
IQDLARRFGI EGQLEDRQRI GWKLVYVDHE NDVLLVGDDP WEEFVNCVRC IKILSPQEVQ  1080
QMSLDGDFGN SILQNQDCSS SDNGVN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein