PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021221.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 374aa MW: 39737.8 Da PI: 7.0899

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021221.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.3	3.3e-39	75	204	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlq a++ai+++tgt++++a+++ ++s +ss+ + s++ Oeu021221.1 75 AAKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQHAEQAIIAATGTGTIPANFStLNVSLRSSGTTISAPpsnssplflgg 172 5799****************************************************************999877777777774444444455677777 PP TCP 89 ...............................k 89 + Oeu021221.1 173 vgadmlgfhhqltsntgfgqdpdenymkkrfR 204 77777776655555555544444444333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MQSQRKNQGG DSGSDNQEPA SLQLVSPHQI SQPEPSHGSG QTPAHGPFLG SISMQSRSSL 60 FSSTTTNNSS DSNKAAKKPS KDRHTKVDGR GRRIRMPALC AARVFQLTRE LGHKSDGETI 120 EWLLQHAEQA IIAATGTGTI PANFSTLNVS LRSSGTTISA PPSNSSPLFL GGVGADMLGF 180 HHQLTSNTGF GQDPDENYMK KRFREDTGEA TSPSAAKLQD QEPNSEPKSG SSQPSNFIPA 240 PAMWAVAPAA TNVGNTFWML PVTGSAATAS TGGGQQEHHE LRQYNAPSMQ RIGGFEFPGV 300 GRGRFSPVQL GSMVLQQQQP AVQQLGLRIS ETNMGTLASI NAYNSRIDLG MNLEQQNQPQ 360 GSESGDENPK DSQ*

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MQSQRKNQGG DSGSDNQEPA SLQLVSPHQI SQPEPSHGSG QTPAHGPFLG SISMQSRSSL  60
FSSTTTNNSS DSNKAAKKPS KDRHTKVDGR GRRIRMPALC AARVFQLTRE LGHKSDGETI  120
EWLLQHAEQA IIAATGTGTI PANFSTLNVS LRSSGTTISA PPSNSSPLFL GGVGADMLGF  180
HHQLTSNTGF GQDPDENYMK KRFREDTGEA TSPSAAKLQD QEPNSEPKSG SSQPSNFIPA  240
PAMWAVAPAA TNVGNTFWML PVTGSAATAS TGGGQQEHHE LRQYNAPSMQ RIGGFEFPGV  300
GRGRFSPVQL GSMVLQQQQP AVQQLGLRIS ETNMGTLASI NAYNSRIDLG MNLEQQNQPQ  360
GSESGDENPK DSQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-58	TCP family protein