PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu021416.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 219aa    MW: 24631.9 Da    PI: 8.3666
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu021416.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.5e-053456123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C++ F++   L  H+++H
  Oeu021416.1 34 YTCNFCKREFKSAQALGGHMNVH 56
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MNVKTLKDSW DFYSTKCNGG GDLLGEFSWP PRFYTCNFCK REFKSAQALG GHMNVHRRER  60
ARLRESPPSD NSQYSLLNLN LEPNPNQILN PNPSPYKILN PHPSENMNPN PSISSSSTLA  120
KFPPFNSTLP QIFPSSTPSC FSATFAEKRW GNDAVPVNHS RPLTTNLLKV ETTKTLSGVK  180
NLTSFEQEKN CEILKTLECV PIREPKEDLD LELRLGYL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-24C2H2 family protein