PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021583.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 356aa MW: 40379.2 Da PI: 6.9105

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021583.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+d++++ G g+W+t ++ g+ R++k+c++rw +yl Oeu021583.1 14 KGPWTPEEDHILIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.1	1.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++ Oeu021583.1 67 RGRFSFEEEETIIQLHSMLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGRAPCCDKS GLKKGPWTPE EDHILIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSMLGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG 120 IDPVTHTPRL DLLHLSAILN SSSQMNFSRL VGMHNLVNPQ LLRLANLLSS TQFQNQNQYL 180 MLQNNAQDNQ ICSNSQLQNH MPPLVQPCQP QNQDIPTCTT LETPNVPISN IDQFRTSDVT 240 NFNPQNCQLN DWPNNQIDVT SFPEDYVPLS NYGYDCVYGS DPPPSDTSTF QSNGSSNFSF 300 RSVLSNMSSP SSSPTPLHSN SIKLTSNSTE EEKESYCSNL LKFNIQDMLD VNEFV*

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGRAPCCDKS GLKKGPWTPE EDHILIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSMLGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG  120
IDPVTHTPRL DLLHLSAILN SSSQMNFSRL VGMHNLVNPQ LLRLANLLSS TQFQNQNQYL  180
MLQNNAQDNQ ICSNSQLQNH MPPLVQPCQP QNQDIPTCTT LETPNVPISN IDQFRTSDVT  240
NFNPQNCQLN DWPNNQIDVT SFPEDYVPLS NYGYDCVYGS DPPPSDTSTF QSNGSSNFSF  300
RSVLSNMSSP SSSPTPLHSN SIKLTSNSTE EEKESYCSNL LKFNIQDMLD VNEFV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-106	MYB family protein