PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021608.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 31644.8 Da PI: 8.718

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021608.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.3e-19	130	184	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq+ +Lee F++ +++s ++r LAk+l+L rqV vWFqNrRa+ k Oeu021608.1 130 RKKLQLSKEQVAVLEETFKQYNTLSPKQRLALAKELNLRPRQVEVWFQNRRARIK 184 677889***********************************************87 PP
2	HD-ZIP_I/II	110.9	8.7e-36	130	219	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk++lskeqv++LEe+F++ ++L+p+++ +la+eL+l+prqv+vWFqnrRAR+k+kq+ + +++L+r+++ l+een+rL+kev++Lr +l Oeu021608.1 130 RKKLQLSKEQVAVLEETFKQYNTLSPKQRLALAKELNLRPRQVEVWFQNRRARIKLKQTKVGCDYLRRRCEILTEENKRLQKEVNDLR-AL 219 69*************************************************************************************9.44 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MAEKDDDLSL SLRCPDNKNL FPSTSNFPSN LMRPALPFMH YHGNDLLKSP AENQHFLKFP 60 NRISETKSFL RGIDVNHPVT VIDYEEVVMA SSPNNTVSSV SGKRSEREEN DGERATSSLE 120 EDDIDDGAGR KKLQLSKEQV AVLEETFKQY NTLSPKQRLA LAKELNLRPR QVEVWFQNRR 180 ARIKLKQTKV GCDYLRRRCE ILTEENKRLQ KEVNDLRALK LSPHFYMNKN PPTTLTVCPQ 240 CEHVAVLSSS SSATQQPNLD AAHHQRPMPM PVSKFQS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	187	RRARIKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	2e-74	HD-ZIP family protein