PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu021609.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 149aa MW: 17484.2 Da PI: 10.5461

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu021609.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.2	1.2e-17	8	55	9	56
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +e ++Lee F++ +++s ++r LAk+l+L rqV vWFqNrRa+ k Oeu021609.1 8 DEVRTVLEETFKQYNTLSPKQRLALAKELNLRPRQVEVWFQNRRARIK 55 567889****************************************87 PP
2	HD-ZIP_I/II	101.6	6.8e-33	8	90	8	91
HD-ZIP_I/II 8 keqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +e ++LEe+F++ ++L+p+++ +la+eL+l+prqv+vWFqnrRAR+k+kq+ + +++L+r+++ l+een+rL+kev++Lr +l Oeu021609.1 8 DEVRTVLEETFKQYNTLSPKQRLALAKELNLRPRQVEVWFQNRRARIKLKQTKVGCDYLRRRCEILTEENKRLQKEVNDLR-AL 90 566789**************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
MRIRYFFDEV RTVLEETFKQ YNTLSPKQRL ALAKELNLRP RQVEVWFQNR RARIKLKQTK 60 VGCDYLRRRC EILTEENKRL QKEVNDLRAL KLSPHFYMNK NPPTTLTVCP QCEHVAVLSS 120 SSSATQQPNL DAAHHQRPMP MPVSKFQS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	58	RRARIKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-54	HD-ZIP family protein