PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022007.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 551aa MW: 59927.2 Da PI: 7.3404

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022007.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	205	249	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ ++k+CErH++rgr+rsrk++e Oeu022007.2 205 DPEPGRCRRTDGKKWRCAKDAVVDQKYCERHMNRGRHRSRKPVEG 249 79****************************************985 PP
2	QLQ	55.6	1.6e-19	138	173	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 + T++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k Oeu022007.2 138 PITPSQWMELEHQALIYKYITANVPIPSNLLYPIRK 173 569******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MDLGLVGFDG FVCSDSSTKT SNDFSSENAT ESKNKWHGSG FLKQRRFADT VNPDDYMDFK 60 VAKTCNNDNF SAVASKEMLI NQKIPFLRSN SSNFSEGQQM LSFSSPNSQT LPYYQQTSCA 120 FSRNPGLNGG GMHGMRGPIT PSQWMELEHQ ALIYKYITAN VPIPSNLLYP IRKALQSAAC 180 STFSGLRHNT LGWGNAFHLG FSNTDPEPGR CRRTDGKKWR CAKDAVVDQK YCERHMNRGR 240 HRSRKPVEGQ PGHSVSGATT TITSKLTPVA SSTSASVVAG GGLSHDHQLN NYQLGSSNSL 300 SATPQINRNF LDKEHVDKGY QRTMSLSTLS SASNLKENQS SIADQDNSYK ESSQSEFQLV 360 CSNSLFNPMN ESSLLMNCGN YGMGNNLDEK ESKSQHPFHQ FMGEWTKNQT DPSAFSWADV 420 RTQLSVSMPM VTSDFMASTS SPTNENLAAS SLRMSQELEA TQMGLGVGTL VNEQSQRQMN 480 WIPISWDSSR GGPLGEVLNS TNTSTGDSKN TTALDLMKEG GNSSPQSASS PTGVLQRGAF 540 GSVSNSSAGE *

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MDLGLVGFDG FVCSDSSTKT SNDFSSENAT ESKNKWHGSG FLKQRRFADT VNPDDYMDFK  60
VAKTCNNDNF SAVASKEMLI NQKIPFLRSN SSNFSEGQQM LSFSSPNSQT LPYYQQTSCA  120
FSRNPGLNGG GMHGMRGPIT PSQWMELEHQ ALIYKYITAN VPIPSNLLYP IRKALQSAAC  180
STFSGLRHNT LGWGNAFHLG FSNTDPEPGR CRRTDGKKWR CAKDAVVDQK YCERHMNRGR  240
HRSRKPVEGQ PGHSVSGATT TITSKLTPVA SSTSASVVAG GGLSHDHQLN NYQLGSSNSL  300
SATPQINRNF LDKEHVDKGY QRTMSLSTLS SASNLKENQS SIADQDNSYK ESSQSEFQLV  360
CSNSLFNPMN ESSLLMNCGN YGMGNNLDEK ESKSQHPFHQ FMGEWTKNQT DPSAFSWADV  420
RTQLSVSMPM VTSDFMASTS SPTNENLAAS SLRMSQELEA TQMGLGVGTL VNEQSQRQMN  480
WIPISWDSSR GGPLGEVLNS TNTSTGDSKN TTALDLMKEG GNSSPQSASS PTGVLQRGAF  540
GSVSNSSAGE *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	5e-75	GRF family protein