PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022203.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 377aa MW: 40795.3 Da PI: 6.8652

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022203.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.6	1.5e-40	72	187	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + Oeu022203.1 72 PPKRTTTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETVEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrstyfds 169 789******************************************************************99987777777777555556666667777 PP TCP 89 .................k 89 + Oeu022203.1 170 nflmpqrrgllpstrlqS 187 777766555555554431 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEGDDDHLHR RLHNFPFQLL EKKEDEPSSS TSTYPSLAIS TADDILNPSA TTPPPTASSS 60 HHVAAETSKK PPPKRTTTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKSDGETVEW 120 LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSMSVPS QLRSTYFDSN FLMPQRRGLL 180 PSTRLQSENS STTLLNFQSP SLNPNLLQAK PELRENTLDL METEECIRRK RRLEQELQLP 240 QHQIGNYFLQ SSTGSIPASH ASIPANFWPS VAGSNNLVMG GDPIWTFPSG NNSAAAASSL 300 YRGTMSSGLH FMNFPTPVTL WPSQQLGSTI GGGGGNGVSG GGSDSEEGQL GMITRLDQYR 360 SGDTRGESES QMSESQ*

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEGDDDHLHR RLHNFPFQLL EKKEDEPSSS TSTYPSLAIS TADDILNPSA TTPPPTASSS  60
HHVAAETSKK PPPKRTTTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKSDGETVEW  120
LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSMSVPS QLRSTYFDSN FLMPQRRGLL  180
PSTRLQSENS STTLLNFQSP SLNPNLLQAK PELRENTLDL METEECIRRK RRLEQELQLP  240
QHQIGNYFLQ SSTGSIPASH ASIPANFWPS VAGSNNLVMG GDPIWTFPSG NNSAAAASSL  300
YRGTMSSGLH FMNFPTPVTL WPSQQLGSTI GGGGGNGVSG GGSDSEEGQL GMITRLDQYR  360
SGDTRGESES QMSESQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-39	TCP family protein