PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022263.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 182aa    MW: 20367.3 Da    PI: 6.8675
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022263.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.45.1e-43281271100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+C+++C+lapyfp ++p kf  +h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g+i +lq+q+++l+++la+++
  Oeu022263.1  28 PCAACKILRRRCVEKCILAPYFPPNDPLKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARLRDPVYGCTGTICQLQHQVNELQEQLAKTQ 125
                  7***********************************************************************************************99 PP

       DUF260  99 ee 100
                  +e
  Oeu022263.1 126 AE 127
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MECCDTKLKS HSLSSSPSPS RQSVVLSPCA ACKILRRRCV EKCILAPYFP PNDPLKFTTA  60
HRVFGASNII KFLQELPESQ RADAVSSMVY EANARLRDPV YGCTGTICQL QHQVNELQEQ  120
LAKTQAELGN MHCQQKNLMA LIWMEMAQSS PISSSQQSLD TIINFQDESN LGYLWEQPLW  180
T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-65LBD family protein