PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022410.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 302aa MW: 34213.9 Da PI: 6.004

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022410.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ + G+ +W+++++ g++R++k+c++rw +yl Oeu022410.1 14 KGPWTAEEDKKLISFILSNGPCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d+++ lG++ W++Ia++++ gRt++++k++w+++ Oeu022410.1 72 EAEEQLVIDLHASLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 67*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRQPCCDKL EVKKGPWTAE EDKKLISFIL SNGPCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEAEEQLVID LHASLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLNMG 120 IDPVTHQSLR KETETLSATD YLADFVKHLP ELPETNGSDE NSCSSDERCD SNLFKNAPLI 180 SSLLGDDPDI PQVDVPWEFP SGEQIFDSVS WDDNISSLLD FQEYETRKKR LGMDLECQNL 240 ERRLALGLEL SLEWEKLKLG VGLGDKILIK FIIVTQRFEE QHVSSVSEKA GNDRPTSSTL 300 L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12350.1	8e-85	MYB family protein