PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022427.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 157aa    MW: 17518.5 Da    PI: 4.9039
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022427.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB50.93.7e-1618113595
        NF-YB   5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                   ++lP a v r++k  l    +++ is  ++a e   + +  fi ++++ a+d c++ kr+tin++d++ al ++ f +yv pl++ l+ +r+ +g
  Oeu022427.1  18 AEELPKAIVRRLVKDKLSqlsSDSEISvfREALEAFSDSARIFIHYLSATANDICKESKRQTINAEDVFKALEEIEFSEYVGPLRASLEDFRKKNG 113
                  5789**********87641116677764479*************************************************************9776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MAEAEKETVV TEKVVAEAEE LPKAIVRRLV KDKLSQLSSD SEISVFREAL EAFSDSARIF  60
IHYLSATAND ICKESKRQTI NAEDVFKALE EIEFSEYVGP LRASLEDFRK KNGGKRSLSS  120
KTKETNKKAK KKDLPSGSET QNKDDENESN KEDNAD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-39NF-YB family protein