PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022534.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 160aa MW: 18513.4 Da PI: 9.9124

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022534.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.5	9.6e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++g+l+ +ss Oeu022534.1 9 KRIENESSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGRLFQFSS 59 79***********************************************96 PP
2	K-box	55.1	3.2e-19	77	147	3	73
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnell 73 +++++++e ++ ++l++e a + k+ie L++++R+llG++L+++s++eLq + +qLekslk+iR++K l Oeu022534.1 77 ETTTNNTEVRHVQHLKNEEAFMTKKIELLESSKRKLLGQGLGTCSVEELQDIDSQLEKSLKNIRARKVLWL 147 45566689999********************************************************7655 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MVRGKIQMKR IENESSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGRLFQFSSS 60 NMENTIEKYL EHAKEKETTT NNTEVRHVQH LKNEEAFMTK KIELLESSKR KLLGQGLGTC 120 SVEELQDIDS QLEKSLKNIR ARKVLWLNSL LELRFYSNC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	6e-65	MIKC_MADS family protein