PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022587.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 263aa    MW: 30093.8 Da    PI: 6.6454
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022587.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l +++ ++G g+W+ +a   g++R +k+c++rw++yl
      Oeu022587.1 16 KGLWSPDEDQRLRNCILKHGHGCWSNVAINAGLHRNGKSCRLRWLNYL 63
                     678*******************************************97 PP
2Myb_DNA-binding47.73.5e-1569114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++++E+e+ + ++k lG++ W  Ia++++ gRt++++k++w++yl
      Oeu022587.1  69 RGMFSQDEEEIVLSLHKTLGNK-WCQIAHKLP-GRTDNEVKNYWHSYL 114
                      788*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGHDKASDKG KKKQKKGLWS PDEDQRLRNC ILKHGHGCWS NVAINAGLHR NGKSCRLRWL  60
NYLRPGLKRG MFSQDEEEIV LSLHKTLGNK WCQIAHKLPG RTDNEVKNYW HSYLKKKVAK  120
MGETEGQGKA ECMNLHTDSS SLKSSLESFE HIEGPLVDSC AQKSNLPRIL FAEWLQFDQF  180
LGWDSDSPPD ALENNGSNSQ DFFMHDLLLN DETYAGEVQP KLNRSINDMF EEQFKFEHQK  240
SESGFAELFT GEFNIDYDAM HI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.12e-51MYB family protein