PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022603.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 623aa    MW: 67951 Da    PI: 7.788
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022603.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.22.4e-1022546223374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  + ++++  a+s+g++e a ++L+rl++ ++  g++ qRl+ay++ AL++r ++         +ps+ +e  s+e++  ++++++vsP++k+++++aN 
  Oeu022603.1 254 QSMIDASIAISEGKNEIALEILTRLRQVSNTIGTSEQRLTAYLASALKSRANH-------FNNPSALTELYSKEHIVTTQMLYDVSPCFKLGFMAANL 344
                  567788889******************************************98.......56888888888*************************** PP

         GRAS 101 aIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  aIlea++ +  +++H++Df+i++G+Q++ Ll+a+a++++g+    l+iT++ +  sg +e+l+ +ge L+ +A+++gv f+f + + +++ +l+ e+L
  Oeu022603.1 345 AILEATSDHlfNKLHVVDFNIGKGGQYVHLLHAFAAKNGGKKlaVLKITTFTDFMSGGEEKLKIVGEGLKVLASKIGVCFSFCI-MNSNIRELTREKL 441
                  ********999***************************6654449********9999**************************9.899********** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +v+++E+laVn++++l++l+desv++e+ rd++L+ vk+lsP+vv+vveqe++ n++++++r+ ea+eyy alfdsl+a+++r++++r+ +E+  lgr
  Oeu022603.1 442 AVDSDEVLAVNFAFELYKLPDESVTTENLRDDLLRRVKGLSPNVVTVVEQEMNANTAPLVARVKEACEYYGALFDSLDATVSRDNSDRVRIEEG-LGR 538
                  **********************************************************************************************.*** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr..kvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  + +n vaceg++r+ r+e ++kWr+rl++aGF++ p+s   a++  + l+  ++++ g++v+e  g +++gW++r+L+++SaWr
  Oeu022603.1 539 KMCNSVACEGRDRVDRCEVFGKWRARLSMAGFQSRPVSPLDANSLLSRLNsgMCSNPGFTVNELCGRICFGWMGRTLTVASAWR 622
                  **************************************977777655554226779***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    
MSSGFYGGGS DFYTVGGRPI TNNLNPKQQV NYRSTLAGIL PDPASQIMPS RRPDLIGKRS  60
LADFQQQSFL QQQQIHNQNG LGFYLRNVKS RPNYQHASPV SPLSLVDFSP VSSISTEVGA  120
ISNPPGNPRY GVPILHQPRP QNMNNVPVGS SFPNLVQNGA GSGVNSGTVS GQECFSTQES  180
EKKLMNHRLQ ELEKQLLCDE DEGEAVSIVT NSEWSDTIQN LINPTQKTIA PSPTSSSSSC  240
ASTSASPPLP CPKQSMIDAS IAISEGKNEI ALEILTRLRQ VSNTIGTSEQ RLTAYLASAL  300
KSRANHFNNP SALTELYSKE HIVTTQMLYD VSPCFKLGFM AANLAILEAT SDHLFNKLHV  360
VDFNIGKGGQ YVHLLHAFAA KNGGKKLAVL KITTFTDFMS GGEEKLKIVG EGLKVLASKI  420
GVCFSFCIMN SNIRELTREK LAVDSDEVLA VNFAFELYKL PDESVTTENL RDDLLRRVKG  480
LSPNVVTVVE QEMNANTAPL VARVKEACEY YGALFDSLDA TVSRDNSDRV RIEEGLGRKM  540
CNSVACEGRD RVDRCEVFGK WRARLSMAGF QSRPVSPLDA NSLLSRLNSG MCSNPGFTVN  600
ELCGRICFGW MGRTLTVASA WR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-147GRAS family protein