PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022677.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 407aa MW: 44607.8 Da PI: 7.8116

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022677.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.4	2.5e-08	231	278	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Oeu022677.1 231 AHSLAERVRREKIGERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 278 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MNQNDPFESA FSSMAASNGI IGDNIVVREL IGRTGNSQEM SMLDHQIAQG NFPINGNRFS 60 SPPSSAPFPA DPGFADRAAR FSCFANKNLG AMNAQLGSNE AELPHRSATN LEPGKISSYQ 120 SFKISSCDKK LGCLSISSTP EKAEFCESRE NSSISEQIPA REVGTNDAND RKRKAVLRGK 180 AKAIPSSNSA NISSENSGSS SKRSKPGDDK CSEPPKDYIH VRARRGQATD AHSLAERVRR 240 EKIGERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAN VNPTMDFNMQ 300 ALLSKDMFQS RGAIHDELQL LDTYPFQCQQ GPNLHSVIPS RIDAFPTNYF NDATGRNQSK 360 QQLSVDNLVS TVWEDDLHSL VQMGNGQNQT QSFHGILPTA QTKAER*

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MNQNDPFESA FSSMAASNGI IGDNIVVREL IGRTGNSQEM SMLDHQIAQG NFPINGNRFS  60
SPPSSAPFPA DPGFADRAAR FSCFANKNLG AMNAQLGSNE AELPHRSATN LEPGKISSYQ  120
SFKISSCDKK LGCLSISSTP EKAEFCESRE NSSISEQIPA REVGTNDAND RKRKAVLRGK  180
AKAIPSSNSA NISSENSGSS SKRSKPGDDK CSEPPKDYIH VRARRGQATD AHSLAERVRR  240
EKIGERMKFL QDLVPGCNKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAN VNPTMDFNMQ  300
ALLSKDMFQS RGAIHDELQL LDTYPFQCQQ GPNLHSVIPS RIDAFPTNYF NDATGRNQSK  360
QQLSVDNLVS TVWEDDLHSL VQMGNGQNQT QSFHGILPTA QTKAER*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-58	bHLH family protein