PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022830.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 142aa MW: 16359.6 Da PI: 6.7857

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022830.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	7.8e-19	65	118	2	55
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rk+ ++tkeq ++Le+ F++ + ++ +++e LA++l+L+ rqV vWFqNrRa++ Oeu022830.1 65 RKKLRLTKEQSHVLEQSFKQYHILNPKQKEGLADQLKLKPRQVEVWFQNRRARY 118 78889***********************************************96 PP
2	HD-ZIP_I/II	80.7	2.3e-26	65	118	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+keq+++LE+sF++ + L+p++K+ la +L+l+prqv+vWFqnrRAR+ Oeu022830.1 65 RKKLRLTKEQSHVLEQSFKQYHILNPKQKEGLADQLKLKPRQVEVWFQNRRARY 118 69***************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MDILSNNSTC LELSIAMPGF SSSSSLQSSG QSDVSAMKDL ELDINQIPSG VEEECVEKEF 60 GGPPRKKLRL TKEQSHVLEQ SFKQYHILNP KQKEGLADQL KLKPRQVEVW FQNRRARYFT 120 MTYYWWQVLF ILKNHDVNFD S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-33	HD-ZIP family protein