PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022877.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 623aa MW: 68595.2 Da PI: 6.4254

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022877.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.4e-09	161	209	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ + + +r RR ri ++++ L+ellP++ + Ka++L v++Ik+Lq Oeu022877.1 161 RQRAYASDRCRRLRISERIDALQELLPHS-----REGGKASVLDDIVDHIKYLQ 209 67778999******************7.....4567899**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MEEQDCEDAL RLVPLTFSGL TNDVSIIVSN GDAYQHSIVK AGSSGIHNIP VPIPQWINCR 60 TPRNYVEFLA EKGFPEIQKG VSYDISAEAS NFGNIYPSQV EEYSRLQGEW AQVMDFTGAE 120 HQLGVQKQAW NEEYSNVSQA NSGLGAAAAN YSSENRRKIS RQRAYASDRC RRLRISERID 180 ALQELLPHSR EGGKASVLDD IVDHIKYLQF QVKDLSRSRL GSESTSSPFI FLEGYGHYFI 240 HEQMIHEPLE EMMGKLFEVN PSAATELLHS RGLYVMPMAF AEGDGNRARW LGPLVAELGK 300 SSSRLGSRLG ASKPHFLELA SAGPAPISSC QLAAGLLLAY KGTDASAQAE HKHEHCQVLL 360 TIGNNYVHHV LSHVRPSCVC VHACADAYDL SHRTEKTMSD GIEYKYSTEY KFKGDVSVND 420 CPIFTKNADL SRSRLGSEST SSPFIFLEGY GHYFIHEQMI HEPLEEMMGK LFEVNPSAAT 480 ELLHSRGLYV MPMAFAEGDG NRARWLGPLV AQLGKSSSRL GSRLGASKPH FLELASVGPA 540 PISSCQLAAG LLLAYKGTDA SAQAEHKHEH CQVLLTIGNN YVHHVLSHVR PSCVCVHACA 600 DAYDLSHRTE KTMSDGWVEG VE*

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MEEQDCEDAL RLVPLTFSGL TNDVSIIVSN GDAYQHSIVK AGSSGIHNIP VPIPQWINCR  60
TPRNYVEFLA EKGFPEIQKG VSYDISAEAS NFGNIYPSQV EEYSRLQGEW AQVMDFTGAE  120
HQLGVQKQAW NEEYSNVSQA NSGLGAAAAN YSSENRRKIS RQRAYASDRC RRLRISERID  180
ALQELLPHSR EGGKASVLDD IVDHIKYLQF QVKDLSRSRL GSESTSSPFI FLEGYGHYFI  240
HEQMIHEPLE EMMGKLFEVN PSAATELLHS RGLYVMPMAF AEGDGNRARW LGPLVAELGK  300
SSSRLGSRLG ASKPHFLELA SAGPAPISSC QLAAGLLLAY KGTDASAQAE HKHEHCQVLL  360
TIGNNYVHHV LSHVRPSCVC VHACADAYDL SHRTEKTMSD GIEYKYSTEY KFKGDVSVND  420
CPIFTKNADL SRSRLGSEST SSPFIFLEGY GHYFIHEQMI HEPLEEMMGK LFEVNPSAAT  480
ELLHSRGLYV MPMAFAEGDG NRARWLGPLV AQLGKSSSRL GSRLGASKPH FLELASVGPA  540
PISSCQLAAG LLLAYKGTDA SAQAEHKHEH CQVLLTIGNN YVHHVLSHVR PSCVCVHACA  600
DAYDLSHRTE KTMSDGWVEG VE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	7e-16	bHLH family protein