PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023236.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 218aa    MW: 25231.2 Da    PI: 5.0797
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023236.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.8e-181670256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 +++ +f++eq++ Le++F ++ ++  +++ + A++lgL  rq+ +WFqN+Ra++k
  Oeu023236.1 16 KNKIRFSDEQIRCLETMFDSETKIEPKKKIQVARELGLHPRQIAIWFQNKRARWK 70
                 56789*************************************************9 PP
2HD-ZIP_I/II115.92.3e-3717108293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +k r+s+eq+++LE++F++e+k+ep++K ++areLgl+prq+a+WFqn+RAR+k+k lE+dy+ Lk++y++l+++ e L+ke+++L  +l++
  Oeu023236.1  17 NKIRFSDEQIRCLETMFDSETKIEPKKKIQVARELGLHPRQIAIWFQNKRARWKSKLLERDYSILKANYNNLASRFEVLKKENQSLIVQLQK 108
                  699***********************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MNTTTTTSSS VKKKMKNKIR FSDEQIRCLE TMFDSETKIE PKKKIQVARE LGLHPRQIAI  60
WFQNKRARWK SKLLERDYSI LKANYNNLAS RFEVLKKENQ SLIVQLQKMK DIQEKAENSI  120
SAHDGESDIA NGNNIKNEVE AAELKQNLSE KHVFSDDENN TRSAADYFDR LDEDVELLKM  180
VEAADSSLTS PEDWGSLDSE EFLNPPTTSY QWWDFWS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.17e-56HD-ZIP family protein