PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023350.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 851aa    MW: 95114.2 Da    PI: 6.2944
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023350.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.16.9e-23142242198
                  EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                  f+k+lt sd++++g +++p++ ae+        +   +  ++l+ +d++  +W++k+i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +
  Oeu023350.2 142 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQT--PPAQELIARDLHDVEWKFKHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--WNEKNQ 235
                  99*****************************7444..44459************************************************..888888 PP

                  .EEEEE- CS
           B3  92 lvvkvfr 98 
                  l+++++ 
  Oeu023350.2 236 LLLGIRH 242
                  9999986 PP
2Auxin_resp112.83.2e-37268351183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  aahaa+t+s F+v+YnPras+seFv+++ +++ka++ ++vsvGmRf+m fete+s  rr++Gt++g+ dldp rWpnS+Wrs+k
  Oeu023350.2 268 AAHAAATNSCFTVFYNPRASPSEFVIPFPNYVKAVYhTRVSVGMRFRMLFETEESCVRRYMGTITGIGDLDPDRWPNSHWRSVK 351
                  79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MGKSDGGREL LELKIREDLG FEILRIANEG GKKCLNSELW HACAGPLVSL PTVGSRVVYF  60
PQGHSEQVAA TTNKEVDAHI PNYPSLPPQL ICQLHNVTMH VDIETDEVYA QMTLQPLNPQ  120
EQKEIYLPVD LGTPSKQPTN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSQTPPAQ  180
ELIARDLHDV EWKFKHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVIFIW NEKNQLLLGI  240
RHANRPQTVM PSSVLSSDSM HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPFPNYVK  300
AVYHTRVSVG MRFRMLFETE ESCVRRYMGT ITGIGDLDPD RWPNSHWRSV KKVCRETWLV  360
ELVTLVQLHC HPKGVDMIFC ENLRINVGWD ESTTGERQPR VSLWEIQPLT TFPMYSSLFP  420
LRLKRPWYPG ASSFHADGSN EAMYNMARFR GEAGVHGHSS MNFQSVGMFP SMPQRFDPPI  480
LRNDLNQQCA MLAAGLQNFG SEELLKQQLV QFQQPVQYFQ HSGSHNPPSQ QQQAVPQSIS  540
SCTLSAQTQM VPANLCRQTQ HSREHLQQHT SAEALVMQHA QLQQMRPSDA PSPSFTKSDL  600
TNSNNELSAS ISPSRMQNIM GFLCSEGQGD LLNFSRSGQS MINEQSPQQS RVVKFAQLPV  660
SNSSNSASLP AYPSVEHETC SLDSQNHTFF GANVDSSGLL PTTVSSLDTS SVRADMSFEP  720
LDASGFQSSL FDYANDLELL QSTGQVDQSN STGTFVKVYK SGSVGRSVDI SRFNSYQELL  780
WELGQMFRIE GLLEGPQRSG WQLVFVDREN DVLLLGDDPW EEFMNNVWYI KILSPEDVQK  840
LERQDSGSLS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein