PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023510.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 342aa MW: 38198.3 Da PI: 8.7675

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023510.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.7	1.2e-09	173	220	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Oeu023510.1 173 SHSLAERVRREKISERMKALQSLVPGC----DKVTGKALMLDEIINYVQSLQ 220 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAAFSSYNQQ HPFPIDSVVL QPNSSIIKIC EQLNSANTAE FGQVIVPSNL GVLRNRCLDQ 60 STKVSFSDNE SNSLMSIKNK NSMDSSSVSD KYESSDQQVS QKITSVAEKK KRKGKLMRSS 120 SNSAQPKDMK ELKGKKQKNV VDKKQPGEEK KESEEDPKGY IHVRARRGQA TDSHSLAERV 180 RREKISERMK ALQSLVPGCD KVTGKALMLD EIINYVQSLQ KQVEFLSMKL ASVNPMFYDF 240 GMDLDAIMVR PDQSLNSLAS QLPTMQQCSP IQPPVIHETN TCLTAPNCYS RLDSLSPLPF 300 QQSHMPNTLP QGNGQLLWDV DEQRQKIISE TGFSNNLFSF N*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAAFSSYNQQ HPFPIDSVVL QPNSSIIKIC EQLNSANTAE FGQVIVPSNL GVLRNRCLDQ  60
STKVSFSDNE SNSLMSIKNK NSMDSSSVSD KYESSDQQVS QKITSVAEKK KRKGKLMRSS  120
SNSAQPKDMK ELKGKKQKNV VDKKQPGEEK KESEEDPKGY IHVRARRGQA TDSHSLAERV  180
RREKISERMK ALQSLVPGCD KVTGKALMLD EIINYVQSLQ KQVEFLSMKL ASVNPMFYDF  240
GMDLDAIMVR PDQSLNSLAS QLPTMQQCSP IQPPVIHETN TCLTAPNCYS RLDSLSPLPF  300
QQSHMPNTLP QGNGQLLWDV DEQRQKIISE TGFSNNLFSF N*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	138	KKKRKGKLMRSSSNSAQPKDMKELKGKKQK
2	110	139	KKKRKGKLMRSSSNSAQPKDMKELKGKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-55	bHLH family protein