PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023537.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 712aa    MW: 79126.1 Da    PI: 6.4614
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023537.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.8e-202378156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 +++ +++t++q+++Le  F+++++p++++r++L+++lgL  rq+k+WFqNrR+++k
  Oeu023537.1 23 KKRYHRHTAYQIQRLEGTFKECPHPDEKTRTQLSRELGLAPRQIKFWFQNRRTQMK 78
                 678899***********************************************998 PP
2START178.53.9e-562224462206
                  HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
        START   2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                  +a  a++el+++ + +ep+W+ks+   e +n + + ++f++ ++       ++ea+r+sgvv+m+   lv  l+d++ +W e ++    +a t++vis
  Oeu023537.1 222 VAGNAMDELIRLLQTNEPLWMKSAdgrEVLNLESYERIFPRPNThlknpnIRIEASRDSGVVIMNGLALVDMLMDTS-KWMELFPtivsRAITIDVIS 318
                  67899*******************999999999******999889****99**************************.9*999999999********* PP

                  TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
        START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                  +g      g+lqlm+ elq+lsplvp R  +f+R+++q ++g wvivdvS d + +  + +s+ +a++lpSg+li++++ng+skvtwve+++ ++r p
  Oeu023537.1 319 PGmlgsqiGTLQLMYEELQVLSPLVPtRQIYFLRFCQQIEQGAWVIVDVSYDLPHQEKQFASSSKAHRLPSGCLIQDMPNGYSKVTWVENWEIEDRAP 416
                  *****************************************************99998899************************************* PP

                  .HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 178 .hwllrslvksglaegaktwvatlqrqcek 206
                   h l+r l++sgla+ga +w++tlqr ce+
  Oeu023537.1 417 iHRLYRDLIHSGLAFGAERWLSTLQRICER 446
                  ****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    
MDFGAGGDDF SGGDHRDDSD RRKKRYHRHT AYQIQRLEGT FKECPHPDEK TRTQLSRELG  60
LAPRQIKFWF QNRRTQMKAQ YERSDNCVLR SENDKIRCVN VTIREALKNV ICPSCGGPPV  120
SEDPYLDEQK LRMENIQLKD ELDRVSTVAA KYIGRPISQL PPVQPFHVSS LDLSMSSYGG  180
PGMAGPSLDL DLLPGSLTGS LQKLLFPKMS ISDMDKSLMA DVAGNAMDEL IRLLQTNEPL  240
WMKSADGREV LNLESYERIF PRPNTHLKNP NIRIEASRDS GVVIMNGLAL VDMLMDTSKW  300
MELFPTIVSR AITIDVISPG MLGSQIGTLQ LMYEELQVLS PLVPTRQIYF LRFCQQIEQG  360
AWVIVDVSYD LPHQEKQFAS SSKAHRLPSG CLIQDMPNGY SKVTWVENWE IEDRAPIHRL  420
YRDLIHSGLA FGAERWLSTL QRICERFACL MVTGNSTLIP SPEGKRSMMK LAQRMVNNFC  480
VSINPSNGEQ WTTVSGSNEF EVRAALHKST DPGQPNAVVL SAATTIWLPI SAQHIFNFFR  540
DERTRPQWDV LSNQNPVQEI AHIANGAHPG NCISVLRALH NNQNMLILQE CCIDSSGSLV  600
VYGPVDFQSI NIVMSGADPS CIELLPSGFA ISPDGRPNDQ FQARGSDHGA STSLNTNIGD  660
GSSGSLITIV FQILVSSLTS AKMSQESVTT VTNLISSTVH QIKAAMNCIT S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein