PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023642.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-other
Protein Properties Length: 129aa    MW: 14968.9 Da    PI: 7.8644
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023642.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox375.9e-12454656
                 S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 +f+k+q ++L+ +Fe++ ++++e+++eL + +gL+ +qV+ WF  +Ra+++
  Oeu023642.1  4 RFEKHQNDALKLAFEESVHLTKEKKTELVRTTGLDMEQVTSWFNRKRARKR 54
                 69***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MANRFEKHQN DALKLAFEES VHLTKEKKTE LVRTTGLDME QVTSWFNRKR ARKRARESIV  60
ELKQTIAELH QALQESQEKE AGLQRELQES RGREAELEAE NQQLKQRITI IEGDLQFDSA  120
LKFLKGHP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-06HD-ZIP family protein