PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023841.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 224aa    MW: 24500.1 Da    PI: 9.7382
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023841.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000876385123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C +C k + ++  L  H++ H
  Oeu023841.1 63 FSCRYCQKKYYSSQALGGHQNAH 85
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDEQDQNQDN NRNTNLVLDL NLSSKDFDQN SGLELNLFDK NPSQNPSNID PSPQGNESEP  60
RVFSCRYCQK KYYSSQALGG HQNAHKRERT IAKRGPRFGG AASLNQYRYS SMGLLPQHGS  120
LNRSLAIQAH STIHKPSLLA PSTIYGQYGG SRKPLDQQPA IGRLAMENHH VGGSSSGGAA  180
RFDSVQKFSS VVNGIGGLRW DSAGPPIKTN QEEHKKLDLS LKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.16e-36C2H2 family protein