PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024062.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 369aa MW: 41807.3 Da PI: 7.4345

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024062.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G+ +W+t ++ g+ R +k+c++rw +yl Oeu024062.1 13 KGPWTPEEDMKLIQYIQVHGPCNWRTLPKNAGLQRHGKSCRLRWTNYL 60 79********************************************97 PP
2	Myb_DNA-binding	45	2.4e-14	66	129	1	47
TSSS-HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ +W++ a++++ gRt++++k++w+++ Oeu024062.1 66 RGRFSFEEEETIIQLHSVLGNKykfclscimlnlnlflliRWSAMAARLP-GRTDNEIKNYWNTH 129 89**********************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGRSPCEKNG VIKGPWTPEE DMKLIQYIQV HGPCNWRTLP KNAGLQRHGK SCRLRWTNYL 60 RPGIKRGRFS FEEEETIIQL HSVLGNKYKF CLSCIMLNLN LFLLIRWSAM AARLPGRTDN 120 EIKNYWNTHI RKRLLRNGID PVTHAQRLDF KDLSSLLNLP QINLSNLLRL QTLLINPEAL 180 RLAAYLLENP ELLLTKLQEN QLFNAQLQNQ TPVFQTDQLQ NTFDLQTPLC NPSTDLPVTA 240 SVSNQSHLIQ GNMGQISKNS DSLSGQTFQN NTTTFENVSF IENFLFGASD QRQKDLSENI 300 SFQSLNSGSN SSKNFSFDSV LSTPLSSPTP LISSSTYMNG NTEDERESNC SNLLKFAIPE 360 SLDFDDFI*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGRSPCEKNG VIKGPWTPEE DMKLIQYIQV HGPCNWRTLP KNAGLQRHGK SCRLRWTNYL  60
RPGIKRGRFS FEEEETIIQL HSVLGNKYKF CLSCIMLNLN LFLLIRWSAM AARLPGRTDN  120
EIKNYWNTHI RKRLLRNGID PVTHAQRLDF KDLSSLLNLP QINLSNLLRL QTLLINPEAL  180
RLAAYLLENP ELLLTKLQEN QLFNAQLQNQ TPVFQTDQLQ NTFDLQTPLC NPSTDLPVTA  240
SVSNQSHLIQ GNMGQISKNS DSLSGQTFQN NTTTFENVSF IENFLFGASD QRQKDLSENI  300
SFQSLNSGSN SSKNFSFDSV LSTPLSSPTP LISSSTYMNG NTEDERESNC SNLLKFAIPE  360
SLDFDDFI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	7e-76	MYB family protein