PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024090.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 305aa    MW: 33326.8 Da    PI: 6.6805
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024090.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.5e-13129175354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+ErrRR+riN+ +++Lr+llP+       K +Ka+ L +++ ++k+L
  Oeu024090.1 129 KSHSEAERRRRERINNHLAKLRSLLPST-----AKTDKASLLAEVILHVKEL 175
                  79*************************6.....5**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MQQQNSTADA YMGGGVGGGS TLTFPEVSQT LPWSLPPVHN FNPVHFSTRD HDPFLIHPAP  60
SVPYGGLLRR PPGLQFGYEG PSTDHLRLIS DSLGQVVHAG SASPFGLQAE LQKMTAQEIM  120
DAKALAASKS HSEAERRRRE RINNHLAKLR SLLPSTAKTD KASLLAEVIL HVKELKRQTS  180
IIAETRPFPT EVDELIVDDA SDEDGTFVIK ASICCEDRPD LLPDLIKTLK ALRLRTLKAE  240
ITTLGGRVKN VLFMTGEEDE PAQQQHYCLS SIQEALKAVM EKSNGDESGS GNVKRQKTNI  300
TIYP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.18e-84bHLH family protein