PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024097.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 395aa MW: 44997.1 Da PI: 9.3914

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024097.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	143.5	1.6e-44	125	275	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssssas 83 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd LG+dk+sktieWL++++k+aikel ++ + ++++ + +s + Oeu024097.1 125 TGKKDRHSKICTAQGVRDRRMRLSIQVARKFFDLQDLLGYDKASKTIEWLFTKSKKAIKELSKNnpkvrtsstiddlngeT-----FVSERDTVSVIE 217 79************************************************************77765543333222221.....223333333333 PP TCP 84 nsssg......kaaksaakskksqksaasalnlak.esrakarararertrekmrikn 134 +s++ ++++s + +k+++k +s+ +++ esr kararar+rtrekm+ik Oeu024097.1 218 GNSISahkgvaRKCASIERKKNDKKLRNSVYKPNTkESRDKARARARDRTREKMMIKG 275 333335566668888888555555555555555545*****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MYPSSSIYNN KPFESLFKRP FPFDQNPSPK QDDPSLSFHF PSPFLDETEL SWNQILSQNQ 60 PMAVHNCIAH DYQIETYVDT TNKETTKCSN IDLSRLNEKS VESTPNKSIT PLRKRNLGPT 120 LLKRTGKKDR HSKICTAQGV RDRRMRLSIQ VARKFFDLQD LLGYDKASKT IEWLFTKSKK 180 AIKELSKNNP KVRTSSTIDD LNGETFVSER DTVSVIEGNS ISAHKGVARK CASIERKKND 240 KKLRNSVYKP NTKESRDKAR ARARDRTREK MMIKGLEDST QWFESNPDDF QQLGPSSSSF 300 EAEEESSSHN QKQGAHTNSL ENRLSDVGII EKFQGDSSSN SWHVSDYSNN NFMGFLGNWD 360 MNNDRINSEM TNIVSFAGNP NSVYLATSDF PFQQ*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MYPSSSIYNN KPFESLFKRP FPFDQNPSPK QDDPSLSFHF PSPFLDETEL SWNQILSQNQ  60
PMAVHNCIAH DYQIETYVDT TNKETTKCSN IDLSRLNEKS VESTPNKSIT PLRKRNLGPT  120
LLKRTGKKDR HSKICTAQGV RDRRMRLSIQ VARKFFDLQD LLGYDKASKT IEWLFTKSKK  180
AIKELSKNNP KVRTSSTIDD LNGETFVSER DTVSVIEGNS ISAHKGVARK CASIERKKND  240
KKLRNSVYKP NTKESRDKAR ARARDRTREK MMIKGLEDST QWFESNPDDF QQLGPSSSSF  300
EAEEESSSHN QKQGAHTNSL ENRLSDVGII EKFQGDSSSN SWHVSDYSNN NFMGFLGNWD  360
MNNDRINSEM TNIVSFAGNP NSVYLATSDF PFQQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	4e-29	TCP family protein