PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024107.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family B3
Protein Properties Length: 213aa    MW: 24105.9 Da    PI: 4.3474
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024107.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-1415100697
                  ..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3   6 tpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  ++ +   + rl lp++f+ e+ g +   + t++l+  +g   +++l  ++ ++ ++l++GW +F + ++L++g ++vF+++g+s+f   v++f
  Oeu024107.2  15 IKLSLDHNVRLLLPRSFV-ECsGRD--LGDTVRLTGYDGIICNIQL--ERADDNIYLGTGWPQFFDHHNLEDGYVLVFEYNGNSTF--DVSIF 100
                  5677788899********.662544..677****************..*********************************99999..88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSNRTDLPHR FVQAIKLSLD HNVRLLLPRS FVECSGRDLG DTVRLTGYDG IICNIQLERA  60
DDNIYLGTGW PQFFDHHNLE DGYVLVFEYN GNSTFDVSIF ECSGVEVTYE SDRDFTYWYS  120
YLPSLEIGGQ LNLETRIRLA ELGNKDLGGS CGSRASLEGN TIKKDYCIQG RFSPLKCDDE  180
LEIIGRTLKR NSVSVTVVNF DEEDEEMPFL TC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-16B3 family protein