PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024185.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 248aa MW: 27948.5 Da PI: 7.7741

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024185.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.8	8.9e-19	89	143	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Lee F+++++++ +++ LA++l+L rqV vWFqNrRa+ k Oeu024185.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRARTK 143 678899***********************************************98 PP
2	HD-ZIP_I/II	123.8	8e-40	89	178	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq ++LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+L+r++++l++en+rL+kev+eLr +l Oeu024185.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTAENRRLTKEVNELR-AL 178 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MQRQNQKSPT ADPFQLSADR HVEGRSFLRG IDMNKPITLT DLEEEVMVSS PNSTVSSLSE 60 KRSEREENEA ERASSSMEVD EDGGDATGRK KLRLTKEQGA VLEETFNEQN TLTPKQKLTL 120 ANQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLRRCCEN LTAENRRLTK EVNELRALKL 180 SPQFYMNISP PTTLTMCPQC ERVAVSSTSS ATRQCNPVAA HHQRPIPVTS LAAMIPSQPL 240 DAHCHNA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	146	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	4e-71	HD-ZIP family protein