PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024186.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 159aa MW: 17943.1 Da PI: 5.4056

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024186.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.3	1.3e-18	89	141	2	54
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ ++tkeq +Lee F+++++++ +++ LA++l+L rqV vWFqNrRa+ Oeu024186.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRAR 141 678899**********************************************8 PP
2	HD-ZIP_I/II	79.2	6.4e-26	89	142	1	54
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARt 54 +kk+rl+keq ++LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRAR Oeu024186.1 89 RKKLRLTKEQGAVLEETFNEQNTLTPKQKLTLANQLNLRPRQVEVWFQNRRARL 142 69***************************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MQRQNQKSST ADPFQLSADR HVEGRSFLRG IDMNKPITLT DLEEEVMVSS PNSTVSSLSE 60 KRSEREENEA ERASSSMEVD EDGGDATGRK KLRLTKEQGA VLEETFNEQN TLTPKQKLTL 120 ANQLNLRPRQ VEVWFQNRRA RLVIFGALSR VLLSFTEC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	2e-26	HD-ZIP family protein