PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024216.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 133aa MW: 15730 Da PI: 10.1692

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024216.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.6e-20	47	99	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++++q + Le+ Fe ++++ e++ +LA+ lgL+ rqV vWFqNrRa++k Oeu024216.1 47 KRKLSEQQMNLLEQSFEDEHKLESERKDKLASDLGLDPRQVAVWFQNRRARWK 99 45899***********************************************9 PP
2	HD-ZIP_I/II	114.3	7.4e-37	46	128	2	84
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 +kr+ls++q++lLE+sFe e+kLe+erK +la++Lgl+prqvavWFqnrRAR+k+k++E++y++Lk+++++ + e++rLe+ev Oeu024216.1 46 RKRKLSEQQMNLLEQSFEDEHKLESERKDKLASDLGLDPRQVAVWFQNRRARWKSKKMEEEYSKLKTQHETTVVEKCRLENEV 128 8*******************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence
MVLISQYYTG VVYDQLLPEQ VEAKARPRRR RKKNKGEAGS CSGVMRKRKL SEQQMNLLEQ 60 SFEDEHKLES ERKDKLASDL GLDPRQVAVW FQNRRARWKS KKMEEEYSKL KTQHETTVVE 120 KCRLENEVRI FL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	49	RRRRKKNKGEAGSCSGVMRKRK
2	29	50	RRRRKKNKGEAGSCSGVMRKRK
3	30	51	RRRRKKNKGEAGSCSGVMRKRK
4	31	52	RRRRKKNKGEAGSCSGVMRKRK
5	46	75	RKRKLSEQQMNLLEQSFEDEHKLESERKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	5e-48	HD-ZIP family protein