PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024328.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 370aa MW: 41792.5 Da PI: 8.8751

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024328.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.3	6.7e-39	118	267	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.....eaesssssasnss 86 + k+drhski T+ g+RdRR+Rls+++a++fF Lqd+LG+dk+skt++WLl+++ ai el + s ss sec + +s+ Oeu024328.1 118 TSKRDRHSKINTAHGPRDRRMRLSLDVARKFFGLQDMLGYDKASKTVDWLLKNSRSAIRELIQGpcvykqscSVSSTSECevmsgI-----NDQSATY 210 679***********************************************************9999888866666778444331.....3333111 PP TCP 87 sg.......kaaksaa.kskksqksaasalnlakesrakarararertrekmriknk 135 ++ ++ + ++k++ks+ + +akesr kar+rar r +ek +++++ Oeu024328.1 211 ENkstinqkSELDKPScAKEKRKKSKVARMTVAKESRRKARERARARATEKRSLRES 267 1133444652223333344555555555789999***************998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MYPSNSNSNF NSISCIDHVI SQPYFVDNDV NSNSKDYHSF SSFFDFPNSP CMHYEYEAVS 60 RQYYDLFHEH NSMTTDENAL PAEINATNMA FSSTTAATDV LKEDCNSKIE QQIPRKRTSK 120 RDRHSKINTA HGPRDRRMRL SLDVARKFFG LQDMLGYDKA SKTVDWLLKN SRSAIRELIQ 180 GPCVYKQSCS VSSTSECEVM SGINDQSATY ENKSTINQKS ELDKPSCAKE KRKKSKVARM 240 TVAKESRRKA RERARARATE KRSLRESEPK TVNNRSSILL KTCPFETGEE PGTRSSNMNP 300 SYEMLAKVEL SSKGAQILGA RNEDNWNTST IFNYQHGAGA ANPGHQPPFT DFLFCTKPWD 360 AYSSFNLSG*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MYPSNSNSNF NSISCIDHVI SQPYFVDNDV NSNSKDYHSF SSFFDFPNSP CMHYEYEAVS  60
RQYYDLFHEH NSMTTDENAL PAEINATNMA FSSTTAATDV LKEDCNSKIE QQIPRKRTSK  120
RDRHSKINTA HGPRDRRMRL SLDVARKFFG LQDMLGYDKA SKTVDWLLKN SRSAIRELIQ  180
GPCVYKQSCS VSSTSECEVM SGINDQSATY ENKSTINQKS ELDKPSCAKE KRKKSKVARM  240
TVAKESRRKA RERARARATE KRSLRESEPK TVNNRSSILL KTCPFETGEE PGTRSSNMNP  300
SYEMLAKVEL SSKGAQILGA RNEDNWNTST IFNYQHGAGA ANPGHQPPFT DFLFCTKPWD  360
AYSSFNLSG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	3e-26	TCP family protein