PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024451.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 408aa    MW: 45781.7 Da    PI: 6.0584
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024451.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.3e-13341386655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  s +++L +Av+YIk+Lq
  Oeu024451.3 341 SIAERVRRTRISERIRRLQELVPNM----DKQTSTSDMLDLAVDYIKDLQ 386
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MNQQQQQQQE QMSSGLTRYK SAPSSYFARL FTSDDGFGGD DLDNIFNHRA ASPETNRVFA  60
SFVESVDTMD QNYSSNISSR AQSKPQFLQS IKHEIIDQQL QRHDSNDFSS VSHMIYQSQS  120
QQGYNSEATT SAMDDSYSRS SSLINSDRVN EMKFNGGSTN LIRHSSSPAG FFANMNIENE  180
FDAMRDVGNF GTGISTKAEA PMFSFKSPMS FSSGHPSSSE MMTIDEMGCK TSSGKGNLEE  240
DGNKNGGYIT SFPAITPWDD DNKMFSSDVF IILTCYFSSF FNLIISYFLD QNTDDQIRRT  300
IPLSHHSSLP KNSALLSEIL SQDSAPCKIR AKRGFATHPR SIAERVRRTR ISERIRRLQE  360
LVPNMDKQTS TSDMLDLAVD YIKDLQMQLK MLSDNRAKCT CSTERKT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.16e-47bHLH family protein