PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024525.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 908aa    MW: 100379 Da    PI: 5.3461
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024525.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.94.5e-24146247199
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+k+lt sd++++g +++p++ ae+       ++++++ ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv a++L++gD v+F   ++++ +l
  Oeu024525.1 146 FCKTLTASDTSTHGGFSVPRRAAEKLfpqldySMQPPT-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFVGAKRLRAGDAVLFI--RDEKSQL 240
                  99*********************999*****9555554.49************************************************..4567778 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  +++v+r 
  Oeu024525.1 241 LLGVRRV 247
                  9999985 PP
2Auxin_resp118.65e-39272355183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  aahaa+++s+F+++YnPra++seF+++++k++k+++ +++svGmRf m+fete+ss+rr++Gt vgvsdldp+rWpnSkWrsL+
  Oeu024525.1 272 AAHAAANRSPFTIFYNPRACPSEFIIPLAKYRKSVYgTQLSVGMRFGMMFETEESSKRRYMGTLVGVSDLDPLRWPNSKWRSLQ 355
                  79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    
MGSVRETPKV GGLVGGAHNL LEEMKLLKEM QDHSGTKKTI NSELWHACAG PLVTLPQVGS  60
LVYYFPQGHS EQVAVSTNRT ATSQIPNYPN LPAQLLCQVH NVTLHVDKDT DEIYAQMSLQ  120
PVNSEKDVFP IPDFGLKPSK HPTEFFCKTL TASDTSTHGG FSVPRRAAEK LFPQLDYSMQ  180
PPTQELVVRD LHDNTWTFRH IYRGQPKRHL LTTGWSMFVG AKRLRAGDAV LFIRDEKSQL  240
LLGVRRVNRQ QTALPSSVLS ADSMHIGILA AAAHAAANRS PFTIFYNPRA CPSEFIIPLA  300
KYRKSVYGTQ LSVGMRFGMM FETEESSKRR YMGTLVGVSD LDPLRWPNSK WRSLQVEWDE  360
PGCGDKQNRV SPWEIETPES LFIFPSLTTS FKRPFHSAFI GAQTEWDNLI NRPFVRVPEN  420
RNGEFQCPSV STLWSEQLMK MLMKPHEVNH PGNIAPSVLE TTINDTALQE SKALVQSAIK  480
QKSEVIPSGM ASLQRDTYPQ TFVGQPNITN TNNFGTSSEL EKIEPVLTTN QLSQFESQGP  540
SNEEKLLVKP MNPPNLVTDL AILNQNSGSL PLQTSPWIMQ SRLDSQILQS PQSDPSQLDS  600
ANVNSLLQNP GRIECNSYVP VCHPPTASFS TPGYASILKR SDQPTTSAEI VCPVLLSTGQ  660
GLWDPQFNNP KCASQENLLD PPPHHDLSNL QYASNSYGLK DLSEESHPQS DIYSCLNLDG  720
SNSGSTVIDP SISNAILEDF CTLKHADFHN PSDYLMGNFS SSQDVQSQIT SASLVDSQTF  780
SLQEYADNSG GASSSNIQKA GSVGRSIDVS SFKNYDELRS EIERMFGLER LLNDSGSGWK  840
LVYVDFESDV LLVGDDPWEE FVGCVRCIRI LSPSEVQQMG EEGMQLLNSA ALQGVNGEGG  900
FNRDGPR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein