PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024590.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HRT-like

Protein Properties

Length: 416aa MW: 46675.7 Da PI: 9.9914

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024590.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	55.9	6.9e-18	315	345	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+++ GsvC++ PvkgRKRC eHKGmR+ Oeu024590.1 315 ICGVAMGKGSVCTKLPVKGRKRCLEHKGMRV 345 8*****************************7 PP
2	HRT-like	54.6	1.8e-17	381	411	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGvil++Gs+C+r+P++g+KRC eHKG+Ri Oeu024590.1 381 ICGVILGNGSPCRREPIRGNKRCLEHKGRRI 411 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MYYLNLPIKY SWRNSITYSI GNGPKCQIRR ISVLYIGPKL TVCRSACLDP LMAARLKRED 60 CSRTKHDSAF SQWKILIGPS DWEDYLSGKE GVGKYRTHNL PNCISCPGIY ELGIAISHDS 120 HPKSGQNTRK LDPSLIIPVY LGQADNVRTR LQQYGRGGAH LENGCSNDGS TNFQIISVNK 180 GPGLFMQIFL KGCSIVYRWA PMKTKRDAER TEAQLLETFD YAWNKGSNGA RRPDDIFKKL 240 DRHPRESQFS LIAKKLQYFQ QKQEGIKIKP CEPYLLQNGS DMDSTGIFSR IYKFGRSRPR 300 LVPIISGSSD DCAGICGVAM GKGSVCTKLP VKGRKRCLEH KGMRVNSKLT TEKNMPYDFS 360 SIDSGIITNL EQPVKENFSP ICGVILGNGS PCRREPIRGN KRCLEHKGRR IHQSA*

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MYYLNLPIKY SWRNSITYSI GNGPKCQIRR ISVLYIGPKL TVCRSACLDP LMAARLKRED  60
CSRTKHDSAF SQWKILIGPS DWEDYLSGKE GVGKYRTHNL PNCISCPGIY ELGIAISHDS  120
HPKSGQNTRK LDPSLIIPVY LGQADNVRTR LQQYGRGGAH LENGCSNDGS TNFQIISVNK  180
GPGLFMQIFL KGCSIVYRWA PMKTKRDAER TEAQLLETFD YAWNKGSNGA RRPDDIFKKL  240
DRHPRESQFS LIAKKLQYFQ QKQEGIKIKP CEPYLLQNGS DMDSTGIFSR IYKFGRSRPR  300
LVPIISGSSD DCAGICGVAM GKGSVCTKLP VKGRKRCLEH KGMRVNSKLT TEKNMPYDFS  360
SIDSGIITNL EQPVKENFSP ICGVILGNGS PCRREPIRGN KRCLEHKGRR IHQSA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	2e-95	HRT-like family protein