PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024598.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 187aa    MW: 21631.8 Da    PI: 10.3691
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024598.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.76.8e-2234130190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY +YA+evGFs r  +s k+  ++e+ +++fvC+keg+ +++ +k      +++++r+r + r+gCkakl++   k + +w vt++++ HnH+l+
  Oeu024598.1  34 EFYYTYAREVGFSARLFNSMKRPGTNEVFWKQFVCYKEGEIDDTYQKkfkhmvERSSKRHRGVIRVGCKAKLTIVSPKsSINWIVTNFVESHNHALT 130
                  6*********************9*****************99998888999998999999************998887799**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MKDETSIQTF TPQVAKERKP KVGQKFEIIE GAYEFYYTYA REVGFSARLF NSMKRPGTNE  60
VFWKQFVCYK EGEIDDTYQK KFKHMVERSS KRHRGVIRVG CKAKLTIVSP KSSINWIVTN  120
FVESHNHALT TPTRVHLLRS HRHVSNAKKG INTTILRSKC IGESTDKFEG DWIQGSSKIL  180
VYIERH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-24FAR1 family protein