PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025006.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 214aa MW: 25041.2 Da PI: 8.4653

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025006.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.5	2.6e-12	25	70	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ed +l+ +v q+G g W Ia++m R +kqc++rw+++l Oeu025006.1 25 GQWIGKEDRRLISLVIQFGLGKWVVIAEEMV-SRVGKQCRERWNNHL 70 677778***********************.***********97 PP
2	Myb_DNA-binding	42.5	1.5e-13	78	118	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT++E+ l++a++ G++ W+ Ia++++ gRt +++k+ w+ Oeu025006.1 78 IWTKDEERWLIQAHEGQGNR-WAEIAKYIP-GRTKNSIKNNWN 118 6*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MAAPVNPDWK EKRGGSSSSR YQIKGQWIGK EDRRLISLVI QFGLGKWVVI AEEMVSRVGK 60 QCRERWNNHL RPHIKKDIWT KDEERWLIQA HEGQGNRWAE IAKYIPGRTK NSIKNNWNAT 120 KRRQISRRRN DEMDFMKTLF ENNQSIDSIP VDHCQLMNPA EGTSENTYSF NIEENYNHPT 180 IFFTSLEILQ TTDSQLPAVE YVENDLFHYC VLA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	2e-46	MYB family protein