PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025036.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 756aa MW: 84507.9 Da PI: 7.2903

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025036.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.9	8.3e-23	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+lt sd++++g +++p++ ae+ + + ++l+ +d++ W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ + Oeu025036.2 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQT--PPAQELIARDLHDVDWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQ 220 99***************************7444..44459********************************************..888999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu025036.2 221 LFLGIRRA 228 9**997 PP
2	Auxin_resp	118.1	7.5e-39	253	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+seFv++++k++ka + ++vsvGmRf+m fete+s rr++Gt++g+ dldpvrWpnS+Wrs+k Oeu025036.2 253 AAHAASTNSCFTIFYNPRASPSEFVIPLSKYVKAAYhTRVSVGMRFRMLFETEESGVRRYMGTITGIGDLDPVRWPNSHWRSVK 336 79****************************9998789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MKLSTSGMSQ QVHEGEKKCL NSELWHACAG PLVSLPTIGS RVVYFPQGHS EQVAATTNKE 60 VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPQEQKDT YLPVELGTPS 120 RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ TPPAQELIAR DLHDVDWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LFLGIRRATR PQTVMPSSVL 240 SSDSMHIGLL AAAAHAASTN SCFTIFYNPR ASPSEFVIPL SKYVKAAYHT RVSVGMRFRM 300 LFETEESGVR RYMGTITGIG DLDPVRWPNS HWRSVKVGWD ESSAGERQPR VSLWEIEPLT 360 TFPMYPSLFP LRLKRPWYSG GSSFQDNSNE AINGMAWMRG ETGEQGLNSM NFQSVGMFPW 420 MQQRVDPTVL RNDLNQQYQA ILAAGLQHCG SGDLLKDQLM QQFQQQPAQY LHHSGSHNPL 480 LHQQQQQVFQ PSISSHMLPT QTQMLSDNLQ RQTQQQVNNV SEEHRQRHNY QESFLMQRVQ 540 LQQRQPSDVP SPSFTKSDFT NSNSKFAASI APGMQNMLGS LCSEESGNHL SFSRPDESIL 600 KEQSPQQSWV VKFSQSPNSN CSNSTSLPPY SGNDTSAEQG TCSLDAQNHS LFGANIENVG 660 LLLPTVVSSI ATSSGHAEMS SMQLGTSGFQ SPLYRFVQDS SELLHNTGQV DQPAPTRTFV 720 KVWKSGSVGR ILDIGRFNSY QELRQELACI RRQGE*

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MKLSTSGMSQ QVHEGEKKCL NSELWHACAG PLVSLPTIGS RVVYFPQGHS EQVAATTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPQEQKDT YLPVELGTPS  120
RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ TPPAQELIAR DLHDVDWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LFLGIRRATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAASTN SCFTIFYNPR ASPSEFVIPL SKYVKAAYHT RVSVGMRFRM  300
LFETEESGVR RYMGTITGIG DLDPVRWPNS HWRSVKVGWD ESSAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWYSG GSSFQDNSNE AINGMAWMRG ETGEQGLNSM NFQSVGMFPW  420
MQQRVDPTVL RNDLNQQYQA ILAAGLQHCG SGDLLKDQLM QQFQQQPAQY LHHSGSHNPL  480
LHQQQQQVFQ PSISSHMLPT QTQMLSDNLQ RQTQQQVNNV SEEHRQRHNY QESFLMQRVQ  540
LQQRQPSDVP SPSFTKSDFT NSNSKFAASI APGMQNMLGS LCSEESGNHL SFSRPDESIL  600
KEQSPQQSWV VKFSQSPNSN CSNSTSLPPY SGNDTSAEQG TCSLDAQNHS LFGANIENVG  660
LLLPTVVSSI ATSSGHAEMS SMQLGTSGFQ SPLYRFVQDS SELLHNTGQV DQPAPTRTFV  720
KVWKSGSVGR ILDIGRFNSY QELRQELACI RRQGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.2	0.0	ARF family protein