PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025097.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 430aa MW: 49078.2 Da PI: 6.7911

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025097.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.3	6.3e-26	111	209	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+q+v++Li+a ++++e+ +++ kk++W+++sk+m+e+g+++sp+qC++k+++lnkrykk++++ +++ +++++++ ++d++ Oeu025097.1 111 KWTDQMVKLLITAISYIGEDPASDAvdaggrrlspilPKKGKWKAISKVMAEKGYQVSPQQCEDKFNDLNKRYKKLNDILGRGtSCKVVENSMLLDSM 208 7******************9987777888899999********************************************669999999999999 PP trihelix 86 e 86 + Oeu025097.1 209 D 209 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDRKSSASRN LKPGKSRGFL DLQAPMQVNE QQNRCQGFMV SSSAQVQDVL PIPNRNMRRF 60 DAPMSLVDCH GKPEVTNNSC DEDNSYSVGQ HAVEHNDGVR EKKELPWQRV KWTDQMVKLL 120 ITAISYIGED PASDAVDAGG RRLSPILPKK GKWKAISKVM AEKGYQVSPQ QCEDKFNDLN 180 KRYKKLNDIL GRGTSCKVVE NSMLLDSMDL SEKAKNAVKK ILGSKQLFYQ EMCSYHNRNR 240 MYIPHDQAIQ RSLHLALRSS DNQESHETRA YVTDSTDKEE ENEASDGVNE DIREKHALSK 300 DLTLRVPAKR KKPGGEHEDM DSSYIMNCHT TVKRSGPHYQ PSVDPLSGEG SDGESLHNQW 360 FMSRTLQLEE QKLQIQAEML ELEKQRIRWL TSSEVEDGEL EKMRLENEYL KLENERLAFE 420 IKCREMGAN*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDRKSSASRN LKPGKSRGFL DLQAPMQVNE QQNRCQGFMV SSSAQVQDVL PIPNRNMRRF  60
DAPMSLVDCH GKPEVTNNSC DEDNSYSVGQ HAVEHNDGVR EKKELPWQRV KWTDQMVKLL  120
ITAISYIGED PASDAVDAGG RRLSPILPKK GKWKAISKVM AEKGYQVSPQ QCEDKFNDLN  180
KRYKKLNDIL GRGTSCKVVE NSMLLDSMDL SEKAKNAVKK ILGSKQLFYQ EMCSYHNRNR  240
MYIPHDQAIQ RSLHLALRSS DNQESHETRA YVTDSTDKEE ENEASDGVNE DIREKHALSK  300
DLTLRVPAKR KKPGGEHEDM DSSYIMNCHT TVKRSGPHYQ PSVDPLSGEG SDGESLHNQW  360
FMSRTLQLEE QKLQIQAEML ELEKQRIRWL TSSEVEDGEL EKMRLENEYL KLENERLAFE  420
IKCREMGAN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-110	Trihelix family protein