PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025346.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 583aa MW: 65785.2 Da PI: 8.0189

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025346.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105	1.2e-32	240	349	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec..eaesssssasnsssg..... 88 g+kdrhsk++T++g+RdRRvRl a++a++f+d+ d+LG+d++sk+++WL+++ak++i+el+ + +++sa ++ e+e+ +++ + +++ Oeu025346.1 240 GRKDRHSKVCTSKGPRDRRVRLAAPTAIQFYDVLDRLGYDRPSKAVDWLIKKAKASIDELAHLpawnpTTDSAANVnfEQEEAQKQLE--ENQrlran 335 89*************************************************************8887755555444332222222222..11123344 PP TCP 89 .............k 89 Oeu025346.1 336 flppsvdfddiadT 349 55555555544440 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MANRSRYLSR SNKPFSCTIG QIVRDAWPSP MGVEPAARTP RVKSVGEDIC ECGKAFNNDV 60 ECRPKFSCYA AAICQCLEPY WKRCSRFVSC SLAEIAQQKI TVNKKLEQQG KKHKNKVLSL 120 DHPPHLYNQN QTETQTQNKV QGVEEESQKT QLAASHEYHQ HLYQSQELFQ QHQRIYSGRL 180 DTQLQQPPLK KRLSSVEHAR LREKMGESTH RHQAPSRLSL RNRGGEILEV EGGHVMRSIG 240 RKDRHSKVCT SKGPRDRRVR LAAPTAIQFY DVLDRLGYDR PSKAVDWLIK KAKASIDELA 300 HLPAWNPTTD SAANVNFEQE EAQKQLEENQ RLRANFLPPS VDFDDIADTV MSFFPMSGSV 360 EASSSAMHFQ SIPTSDLISR TSSHSQDLRL PLQSFQDPIL LHHHHNEQPH QYQIPSHHTE 420 QTHVQAQAQA PVRFTETTPL PLGFDDNIGR SEHYQQPSWN NSGNASSGSG GEAGFLFDFP 480 PAAQLLGQNQ FFSQRGPLQS SNTPSFRTWM YSPAITIATS DHSQQYHPEI VPIYRTSISG 540 VGFTSGIGTF SGFHFPARIQ GDEEEHDRYP EKPSFASSDS RH*

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MANRSRYLSR SNKPFSCTIG QIVRDAWPSP MGVEPAARTP RVKSVGEDIC ECGKAFNNDV  60
ECRPKFSCYA AAICQCLEPY WKRCSRFVSC SLAEIAQQKI TVNKKLEQQG KKHKNKVLSL  120
DHPPHLYNQN QTETQTQNKV QGVEEESQKT QLAASHEYHQ HLYQSQELFQ QHQRIYSGRL  180
DTQLQQPPLK KRLSSVEHAR LREKMGESTH RHQAPSRLSL RNRGGEILEV EGGHVMRSIG  240
RKDRHSKVCT SKGPRDRRVR LAAPTAIQFY DVLDRLGYDR PSKAVDWLIK KAKASIDELA  300
HLPAWNPTTD SAANVNFEQE EAQKQLEENQ RLRANFLPPS VDFDDIADTV MSFFPMSGSV  360
EASSSAMHFQ SIPTSDLISR TSSHSQDLRL PLQSFQDPIL LHHHHNEQPH QYQIPSHHTE  420
QTHVQAQAQA PVRFTETTPL PLGFDDNIGR SEHYQQPSWN NSGNASSGSG GEAGFLFDFP  480
PAAQLLGQNQ FFSQRGPLQS SNTPSFRTWM YSPAITIATS DHSQQYHPEI VPIYRTSISG  540
VGFTSGIGTF SGFHFPARIQ GDEEEHDRYP EKPSFASSDS RH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-66	TCP family protein