PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025373.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 749aa MW: 82516.5 Da PI: 7.1181

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025373.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	122.7	1.6e-38	38	115	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C++dl++ak+yhrrh+vCe+h+ka+v++v+g++qrfCqqCsrfhe+sefDe+krsCrrrL +hnerrrk++a Oeu025373.2 38 CCQADKCTVDLNDAKTYHRRHRVCEQHAKAAVAIVAGIRQRFCQQCSRFHEVSEFDEAKRSCRRRLLGHNERRRKNSA 115 6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MDDDDFMSSA TEDDKKKKGG GSGATKKGSS GGASSMRCCQ ADKCTVDLND AKTYHRRHRV 60 CEQHAKAAVA IVAGIRQRFC QQCSRFHEVS EFDEAKRSCR RRLLGHNERR RKNSADSHSS 120 EGGSSRTGNQ ICGQNSFYTL LMLISRPLTV CKLSHVTIMT MNEYFFSESL ESHCNSTTYW 180 MGSAELNSGD TVIELLNSME AMCFARKLLN RPYITPNFLA PASVELNEFY LGPFFNNAEA 240 VEQAAVGQLF LCTQGPPFLN SLPLGPLRER DRFHIINKAE AEAINARNLL LTSHFSLAPF 300 NSSRAIHPRF EQLWPSVKHR LFATDANRAF HSLDQPSISF PPPILVTPLS IWSPSPPHRA 360 KQSTHPSSSL PAKPTAAKSV PNRKRPASAS PILEDDVEDD DDTPLIIRRK KISASPLKAL 420 VSAAPASSSS VEAASSKPTN EGTTLKETSS VPESSSQPMD EPPSSQGVDP PNIEVEDAPM 480 SLAVVATSSR LDKGKSSRMV VPQVADLAGD MPSSKIIDEI VRSIQDLFAS WGQVKTSHLA 540 PAGRPATSSE EDMKFFKQSI FEYVSFMDMD IGKASAAIYK DKLEHLNAKL EQALTLPSLN 600 LSADFKTTLK VIHSEVLSLL AKNVELKAKS TQYLRAVSEK ESLLLEINNA EDELKEISSE 660 VMIGNSLMAS LAAQMKELQA KMDDCMARMA AKKRNVSLGI ERTKSLVEQY KKLEVDDDVV 720 AELNITSSRQ NEDWEKLRER IRSVWDGL*

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MDDDDFMSSA TEDDKKKKGG GSGATKKGSS GGASSMRCCQ ADKCTVDLND AKTYHRRHRV  60
CEQHAKAAVA IVAGIRQRFC QQCSRFHEVS EFDEAKRSCR RRLLGHNERR RKNSADSHSS  120
EGGSSRTGNQ ICGQNSFYTL LMLISRPLTV CKLSHVTIMT MNEYFFSESL ESHCNSTTYW  180
MGSAELNSGD TVIELLNSME AMCFARKLLN RPYITPNFLA PASVELNEFY LGPFFNNAEA  240
VEQAAVGQLF LCTQGPPFLN SLPLGPLRER DRFHIINKAE AEAINARNLL LTSHFSLAPF  300
NSSRAIHPRF EQLWPSVKHR LFATDANRAF HSLDQPSISF PPPILVTPLS IWSPSPPHRA  360
KQSTHPSSSL PAKPTAAKSV PNRKRPASAS PILEDDVEDD DDTPLIIRRK KISASPLKAL  420
VSAAPASSSS VEAASSKPTN EGTTLKETSS VPESSSQPMD EPPSSQGVDP PNIEVEDAPM  480
SLAVVATSSR LDKGKSSRMV VPQVADLAGD MPSSKIIDEI VRSIQDLFAS WGQVKTSHLA  540
PAGRPATSSE EDMKFFKQSI FEYVSFMDMD IGKASAAIYK DKLEHLNAKL EQALTLPSLN  600
LSADFKTTLK VIHSEVLSLL AKNVELKAKS TQYLRAVSEK ESLLLEINNA EDELKEISSE  660
VMIGNSLMAS LAAQMKELQA KMDDCMARMA AKKRNVSLGI ERTKSLVEQY KKLEVDDDVV  720
AELNITSSRQ NEDWEKLRER IRSVWDGL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	3e-29	SBP family protein