PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025534.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 343aa MW: 38085.5 Da PI: 7.6941

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025534.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102	1e-31	45	160	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak +i+el+ ++ ++ c +++ + +s++ + Oeu025534.1 45 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKNEIDELPPLQIPPG--CfSQNIHPMLNSHEFRPpqsdkevlki 140 689*************************************************************66666..321111111111111112222234433 PP TCP 89 ...................k 89 + Oeu025534.1 141 sngiswneplkqsrtdlwgD 160 33333333332222223320 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MTTREVDFNT KPESSTGDVG KIPSSSPTSW SRLKDPRIVR VSRAFGGKDR HSKVCTVRGL 60 RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKN EIDELPPLQI PPGCFSQNIH 120 PMLNSHEFRP PQSDKEVLKI SNGISWNEPL KQSRTDLWGD KSKDVSGETT MARSEEEKQC 180 NLDSEEAYVS ANNLFPKPSQ SSLPGLLNNA MPYNSFLRWD PSNPSLSHSR SAGLTVQPED 240 FHNFNLVPLS SSAVSVPSGS QQVLVYQPRM TQSYFPSPEE FDPKQVHFQN PSSQLSNSLT 300 SPVHSTAESV RPLHFSMTAS LLPSQNNGGR EPNKHGQFND PV*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MTTREVDFNT KPESSTGDVG KIPSSSPTSW SRLKDPRIVR VSRAFGGKDR HSKVCTVRGL  60
RDRRVRLSVP TAIQLYDLQD RLGLNQPSKV VDWLLNAAKN EIDELPPLQI PPGCFSQNIH  120
PMLNSHEFRP PQSDKEVLKI SNGISWNEPL KQSRTDLWGD KSKDVSGETT MARSEEEKQC  180
NLDSEEAYVS ANNLFPKPSQ SSLPGLLNNA MPYNSFLRWD PSNPSLSHSR SAGLTVQPED  240
FHNFNLVPLS SSAVSVPSGS QQVLVYQPRM TQSYFPSPEE FDPKQVHFQN PSSQLSNSLT  300
SPVHSTAESV RPLHFSMTAS LLPSQNNGGR EPNKHGQFND PV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	1e-46	TCP family protein