PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025789.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 305aa MW: 31799 Da PI: 6.3682

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025789.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2.1e-09	162	206	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L Oeu025789.1 162 HSIAERLRRERIAERIRALQELVPSvN------KSDRAAMLDEIVDYVKFL 206 99*********************55......99************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MANNPGEATS DDFLEQIFGY PAYTGGAETN MVGNDAAASL GAAPAPMLLQ LSSGDCSGHL 60 GGMGVGLGVG IGSAYAGGAS GGGVGFPLGL SLEQGKGGFM KIDDASGSGK RFRDNVVDSR 120 AASSVKAGFR GQPMPSMAPA MPHSPAARPR VRARRGQATD PHSIAERLRR ERIAERIRAL 180 QELVPSVNKS DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG AGAVAPLVTE IPINSVEVEG 240 GENERAQPAW EKWSNDGTEL QVAKLMEENV GAALQFLQSK ALCIMPISLA SVIYHTQPPD 300 TSHS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	172	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.3	1e-82	bHLH family protein