PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025805.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 504aa MW: 55916 Da PI: 5.4166

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025805.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.4e-13	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu025805.1 357 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 403 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MTDKFWLNEE GKAMVEGVLG SEATEYFVWS ASNNVLSEFT GLSGDLGVLQ GLCKIVEGSD 60 WTYAIYWQVA KSKSGKSALI WGDGHLKEST EGEDKDGFSS DSQKPAEGDL RKLVLQKILT 120 CFGRLNDDNM LTKLDQVSEV EMFYLMSMYF AFPFDKPSIP SQSFNSARSI WVSDVKSCLE 180 HYQSRSYLAK SAHLETVAFV PLKSGVVEIG SKKSIPEDQN VIKLAKSIVC KPNSAQPKVC 240 PKIFGQELSL GGSKSGPISI SFSPKVEDDS GFSSESYDVQ TLGSSRVYGN SSNGHRSDEG 300 EAKLFPQMNQ IIVRGSNSHD IVSSMDQTIE DSLLLADDRK PRKRGRKPAN GREEPLNHVE 360 AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT DLQTKIRILE AEKEMVSNKQ 420 NNDDIPEMDF YERHDDAVVR VKFPLDSHPV SGVVKMLREH QAVVQESSIS ISDNGQVVHT 480 FSLETQGDTA EQLKEKLTAS LLQ*

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MTDKFWLNEE GKAMVEGVLG SEATEYFVWS ASNNVLSEFT GLSGDLGVLQ GLCKIVEGSD  60
WTYAIYWQVA KSKSGKSALI WGDGHLKEST EGEDKDGFSS DSQKPAEGDL RKLVLQKILT  120
CFGRLNDDNM LTKLDQVSEV EMFYLMSMYF AFPFDKPSIP SQSFNSARSI WVSDVKSCLE  180
HYQSRSYLAK SAHLETVAFV PLKSGVVEIG SKKSIPEDQN VIKLAKSIVC KPNSAQPKVC  240
PKIFGQELSL GGSKSGPISI SFSPKVEDDS GFSSESYDVQ TLGSSRVYGN SSNGHRSDEG  300
EAKLFPQMNQ IIVRGSNSHD IVSSMDQTIE DSLLLADDRK PRKRGRKPAN GREEPLNHVE  360
AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT DLQTKIRILE AEKEMVSNKQ  420
NNDDIPEMDF YERHDDAVVR VKFPLDSHPV SGVVKMLREH QAVVQESSIS ISDNGQVVHT  480
FSLETQGDTA EQLKEKLTAS LLQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	347	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-144	bHLH family protein