PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025824.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 230aa MW: 25552.3 Da PI: 6.7711

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025824.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.9	1.7e-38	7	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC+++Cv+apyf +eq +++f ++hk+FGasnv+kll++lp +r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+++la+l Oeu025824.1 7 PCGACKFLRRKCVRGCVFAPYFSHEQgAAHFSAIHKVFGASNVSKLLSHLPVCDRYEAAVTISYEAQARVQDPIYGCVSHIFALQQQVFNLQVQLASL 104 7***********************89******************************************************************99 PP DUF260 98 kee 100 ke+ Oeu025824.1 105 KEQ 107 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MKGSGSPCGA CKFLRRKCVR GCVFAPYFSH EQGAAHFSAI HKVFGASNVS KLLSHLPVCD 60 RYEAAVTISY EAQARVQDPI YGCVSHIFAL QQQVFNLQVQ LASLKEQAAQ SILNSSKNVD 120 PNQKFYSGTN SFSQDVKSWF QSSQNQGLLS QLYANSSSTN IREMAPYFES STMNDLNPLG 180 NNENSAFLEK NTSFGSRDSL ELQSNDREWP FQDDGDDLQS VTFRYIQHS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	9e-55	LBD family protein