PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu025893.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 254aa    MW: 28387 Da    PI: 6.3654
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu025893.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.3e-08133180455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  Oeu025893.1 133 SHSLAERARRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 180
                  8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEFMNPFPEI NPSYEDTSVL NLQNLMGFPN DNIFPHLVPE CTGISEDFPG LFIHEDKNFV  60
PQTANDHLAE KKRKEIDTSQ SSGANLSAQG SLNGVTRKNS AGRGKRAKLN GKEEEKRRDV  120
VHVRAKRGQA TDSHSLAERA RRGKINERLR CLQDIVPGCY KTMGMAVMLD EIINYVQSLQ  180
SQVEFLSMKL TAASMFYDFN SETDAFETMQ QEKACEALKM QKMAKEGCEG ISSAQFGSLD  240
LSFGNYPSWP RNT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.19e-63bHLH family protein