PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025900.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-other

Protein Properties

Length: 475aa MW: 53933.3 Da PI: 8.426

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025900.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.8e-18	14	69	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q+e+Le+l+++++yp+++ + ++A+++gLte+q++ WF+ rR k+k+ Oeu025900.1 14 KKRKVKTRAQVEALEKLYNEHKYPTESLKLQIAESTGLTEKQISGWFCHRRLKDKR 69 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MHSEDDKALP ENNKKRKVKT RAQVEALEKL YNEHKYPTES LKLQIAESTG LTEKQISGWF 60 CHRRLKDKRL SNEKTYEFGR QDRSSRGIQD RGSGHRQDSC GSTKQGDDRN SDTREVESGR 120 LTVQEFSAAE LTYEHGSHYT GNYDPTDDAS SGSSSLIRNI SSHPNRDPSD MATSRYLTPK 180 IPVDAKHVKS RPGPSGYLKV KDQVENPAIT AVKRQLGTHY REDGPPLGIE FDPLPFGAFE 240 SSMQDPDNEP YYDGEPFLLA SPDDSKIQRH PNFGKGYEYN SNRVSRYSDM DRTSFKMRHW 300 SDIPGNNLQQ KFGQKPNLSN HSDYCSEDFS EGFARDRPGF KSRDDRQMKP HEDSVSSQHD 360 YIEHESSNLT IKGKEYHYNR EKGLSRGIIK SGMDFGETRA VNDNCEPVRV KMSLKNEIRA 420 AKRVKGEFLQ QHVKGSSVLD NQPWAHHVKR SAVKKPSSVS EDFRSAETSS NCSR*

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MHSEDDKALP ENNKKRKVKT RAQVEALEKL YNEHKYPTES LKLQIAESTG LTEKQISGWF  60
CHRRLKDKRL SNEKTYEFGR QDRSSRGIQD RGSGHRQDSC GSTKQGDDRN SDTREVESGR  120
LTVQEFSAAE LTYEHGSHYT GNYDPTDDAS SGSSSLIRNI SSHPNRDPSD MATSRYLTPK  180
IPVDAKHVKS RPGPSGYLKV KDQVENPAIT AVKRQLGTHY REDGPPLGIE FDPLPFGAFE  240
SSMQDPDNEP YYDGEPFLLA SPDDSKIQRH PNFGKGYEYN SNRVSRYSDM DRTSFKMRHW  300
SDIPGNNLQQ KFGQKPNLSN HSDYCSEDFS EGFARDRPGF KSRDDRQMKP HEDSVSSQHD  360
YIEHESSNLT IKGKEYHYNR EKGLSRGIIK SGMDFGETRA VNDNCEPVRV KMSLKNEIRA  420
AKRVKGEFLQ QHVKGSSVLD NQPWAHHVKR SAVKKPSSVS EDFRSAETSS NCSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	2e-68	HB-other family protein