PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025976.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 418aa MW: 46708.5 Da PI: 4.8189

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025976.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.6	4.6e-07	3	35	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ ++e++ + +C+++ +lC +C ++H+ Oeu025976.1 3 QLCDFCSEQRSTVYCRSDAACLCLTCDRNIHSA 35 57*****************************64 PP
2	CCT	55	3e-19	360	403	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a+lRYkeKrk RkF +kirY RKa+A+ R+RvKGr+vk+ Oeu025976.1 360 RDCAVLRYKEKRKLRKFGRKIRYPNRKAMADVRKRVKGRYVKAG 403 7789*************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGQLCDFCSE QRSTVYCRSD AACLCLTCDR NIHSANALSR LHLRTLVCER CNSQPAVVRS 60 ITENASLCQN CDWNGHGDPT SDTGHKRQTI NCYSGCPSAS ELSRIWSFFS MDDSSCKHET 120 GSMSLEEEDQ SLLHCQLMPI EYSRVEDAMD PATSDADRIC GNDSLNLLDE KVASDSQFLY 180 IAIQLQIFNT SGLIPLHLCY FWLLLLVDWG LNAKKARLSY TSGLIADDDD LYKDFNFSDI 240 DLSFDNLDEL FGGSPGTPQQ LFELDGLDSL FEIPTLCCAE INKATCCNPV FADSVTSCRT 300 YPIVGFARQA QSNLSFSFSG QTGESNNGDY QECGMSSMFM LEEPQCLTSC PESQLPSVSR 360 DCAVLRYKEK RKLRKFGRKI RYPNRKAMAD VRKRVKGRYV KAGDPYDYDP LCHTSSH*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGQLCDFCSE QRSTVYCRSD AACLCLTCDR NIHSANALSR LHLRTLVCER CNSQPAVVRS  60
ITENASLCQN CDWNGHGDPT SDTGHKRQTI NCYSGCPSAS ELSRIWSFFS MDDSSCKHET  120
GSMSLEEEDQ SLLHCQLMPI EYSRVEDAMD PATSDADRIC GNDSLNLLDE KVASDSQFLY  180
IAIQLQIFNT SGLIPLHLCY FWLLLLVDWG LNAKKARLSY TSGLIADDDD LYKDFNFSDI  240
DLSFDNLDEL FGGSPGTPQQ LFELDGLDSL FEIPTLCCAE INKATCCNPV FADSVTSCRT  300
YPIVGFARQA QSNLSFSFSG QTGESNNGDY QECGMSSMFM LEEPQCLTSC PESQLPSVSR  360
DCAVLRYKEK RKLRKFGRKI RYPNRKAMAD VRKRVKGRYV KAGDPYDYDP LCHTSSH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-102	CO-like family protein