PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu026216.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 441aa    MW: 49579.7 Da    PI: 5.2524
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu026216.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS216.31.6e-66383773350
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshltaN 99 
                  + Ll +Ae +s +++ +a++lL++    asp ++p++R+++yfteAL++r+ r++ ++    +  + +e  ++  +++++l   +  P+ ++s++t  
  Oeu026216.1  38 SNLLMAAENFSIEQFDRAEKLLNQCVLFASPCDSPLRRVVTYFTEALRERMDRESGRIDLERKIVDVEE--HALMFKSVSLsCEQKLPLSQISQFTGM 133
                  68999************************************************6666665555555543..2222333333489999*********** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  qaIl++v++ +++H iDf+i  G + + L+q LasR++ p   l+iT+vg     sk  le+tg+ L++fAe+l++pf f++ v ++l+dl+   ++v
  Oeu026216.1 134 QAILDSVASTRKIHLIDFGIRSGSHLIILMQGLASRNDCPVeLLKITAVGT----SKIWLEKTGKTLSSFAESLKLPFLFKT-VISQLSDLKEGFFEV 226
                  *************************************6655499*******....9**************************.799************ PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  + +E++aV l l+l  +l+ +  +es    ++ +vk+l+P v+vvve e+++n++ F +rf ea+   s++ d l++ l  +s  r+ vE+ ++++ i
  Oeu026216.1 227 EAEEMVAVFLFLKLCGILAWPNRIES----FIGFVKKLNPCVIVVVEMEVNTNTPIFIDRFYEAIFLASTICDLLDTCLKGDSMFRNIVEETYFREMI 320
                  ******************77777776....******************************************************************** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyr 350
                     +a eg+e+++r  +   Wre + ++ + +++ls     qa+l+l++ + +   +
  Oeu026216.1 321 LRTIAEEGEEKIHRFAKIDFWREFFARFDLVEAELSALSLYQANLVLKTSPcWSSAT 377
                  ***********************************************9887555455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MKLARMRLHE DCSSNSINPL KFQSGISEEN LKDMELASNL LMAAENFSIE QFDRAEKLLN  60
QCVLFASPCD SPLRRVVTYF TEALRERMDR ESGRIDLERK IVDVEEHALM FKSVSLSCEQ  120
KLPLSQISQF TGMQAILDSV ASTRKIHLID FGIRSGSHLI ILMQGLASRN DCPVELLKIT  180
AVGTSKIWLE KTGKTLSSFA ESLKLPFLFK TVISQLSDLK EGFFEVEAEE MVAVFLFLKL  240
CGILAWPNRI ESFIGFVKKL NPCVIVVVEM EVNTNTPIFI DRFYEAIFLA STICDLLDTC  300
LKGDSMFRNI VEETYFREMI LRTIAEEGEE KIHRFAKIDF WREFFARFDL VEAELSALSL  360
YQANLVLKTS PCWSSATIEI RSVWVRFLRH GIGLLVVANG GDVVQCSIGN GATVVQVMGR  420
RMEIVVVIVT VDTTCGSTGA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.13e-35GRAS family protein