PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu026411.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 633aa    MW: 69743.1 Da    PI: 6.1671
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu026411.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.38.9e-952726313374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L+++Ae + +g++++aq +Larl++  sp g+p+qR a+y++eAL+  l+   +++ + lp  +t+  ++  ++ a+k+fsevsP+++f ++taNq
  Oeu026411.2 272 DQLYKAAELILAGNFSNAQGILARLNQVLSPIGKPFQRTAFYLKEALHLALLM--PNMGSPLPRIPTP-FDVMFKMGAYKIFSEVSPLVQFMNFTANQ 366
                  79*************************************************98..9999999888876.78999************************ PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..eleeLrv 196
                   Ilea++++e++HiiDfdi+ G+QW +++q+L    +g+psl+iT+++sp+++++ el+ ++e+L++fA+ l+v+f+ +v+  ++++    +l+++r 
  Oeu026411.2 367 VILEALDNAEEIHIIDFDIGFGAQWSSFMQELPRSGQGAPSLKITAFASPSTHHAVELSLMHENLTQFANDLHVNFNLEVMNIDSFDPNsnSLSSFRS 464
                  ********************************9999********************************************977766543237888899 PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  +++E+++Vn+ +  ++ +   +s     +++L ++k+lsPk++v  ++ +d+++ +F  ++l++l+yy al++s+ea+   +s+  +kvE++l++++i
  Oeu026411.2 465 SKNETIVVNFPIWSMESH---LS---VLPSLLCFIKKLSPKIMVSLDRGCDRTDLPFSGHILNSLQYYEALLNSIEAT-NMASDSINKVEKFLFQPRI 555
                  99********99766665...33...3558*********************************************888.6789999************ PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +  v  + ++     + +  W++ + +aGF   ++s++a++qa++++++ +++g++ve+++ slvl+W++++L+sv+aWr
  Oeu026411.2 556 ETTVLGRLRA----PNLMPPWSNLFASAGFFHTSISNFAETQAECVVKRSQVKGFHVEKQRSSLVLCWQHHALMSVTAWR 631
                  *****99988....999**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
MADLQPGHNT TGLELTNGVS ENFHLGVEDW ESLLSESEGQ DSLLRWISTG DVDESSLSLK  60
QLLLAGNSNE TQGNVGCFGA IDSAISPVGN VFSGLNTSAF GLSGCGFSLN VNNNGKIGQF  120
SNSINDNNSK KLLSLPNGMS FHNQQYGNLE QKAQIFSPRV GLQQLQVQNA LNLNPLNLNS  180
LSNGSAREKP LHYIQPPLNF HNPSAVEFDL GFQNATVPFL DPLGFGQQPN FVPLHQLQQK  240
PMLVPKQEVA SGSGEQMVAP HCQQLHQQNV NDQLYKAAEL ILAGNFSNAQ GILARLNQVL  300
SPIGKPFQRT AFYLKEALHL ALLMPNMGSP LPRIPTPFDV MFKMGAYKIF SEVSPLVQFM  360
NFTANQVILE ALDNAEEIHI IDFDIGFGAQ WSSFMQELPR SGQGAPSLKI TAFASPSTHH  420
AVELSLMHEN LTQFANDLHV NFNLEVMNID SFDPNSNSLS SFRSSKNETI VVNFPIWSME  480
SHLSVLPSLL CFIKKLSPKI MVSLDRGCDR TDLPFSGHIL NSLQYYEALL NSIEATNMAS  540
DSINKVEKFL FQPRIETTVL GRLRAPNLMP PWSNLFASAG FFHTSISNFA ETQAECVVKR  600
SQVKGFHVEK QRSSLVLCWQ HHALMSVTAW RC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-100GRAS family protein